RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 SLC48A1Q6P1K1 146 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 FRRS1Q6ZNA5 592 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 LRRTM4Q86VH4 590 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 FANK1Q8TC84 345 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 CD99L2Q8TCZ2 262 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 SLC35A4Q96G79 324 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 PGLYRP3Q96LB9 341 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 NDC1Q9BTX1 674 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 DPH1Q9BZG8 443 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 KLHL1Q9NR64 748 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 UCKL1Q9NWZ5 548 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 CLEC4AQ9UMR7 237 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 UNC119BA6NIH7 251 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 SLC9A3R1O14745 358 aaPredicted RBP18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 HYAL3O43820 417 aaPredicted RBP18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 UBL3O95164 117 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 IFNA7P01567 189 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 PEPDP12955 493 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 DNASE1P24855 282 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 RAG2P55895 527 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 SRP54P61011 504 aaKnown RBP18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 AGERQ15109 404 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 KLHL12Q53G59 568 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 ABHD17CQ6PCB6 329 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 TMEM65Q6PI78 240 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 ERN2Q76MJ5 926 aaKnown RBP18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 BTN2A1Q7KYR7 527 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 GPALPP1Q8IXQ4 340 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 TOR1AIP2Q8NFQ8 470 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 BEST4Q8NFU0 473 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 PXYLP1Q8TE99 480 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 KAT2AQ92830 837 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 INPP5EQ9NRR6 644 aa18.2■□□□□ 0.5
PDLIM3-212ENST00000620787 ZNF593O00488 134 aaPredicted RBP18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 ANKRD34CP0C6C1 535 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 ZP1P60852 638 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 DEFB103AP81534 67 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 MESP2Q0VG99 397 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 MFSD13AQ14CX5 517 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 LTB4RQ15722 352 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 GRK1Q15835 563 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 AANATQ16613 207 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 C12orf40Q86WS4 652 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 PIAS4Q8N2W9 510 aaPredicted RBP18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 TTLQ8NG68 377 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 OR2A1Q8NGT9 310 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 OR51Q1Q8NH59 317 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 NXPE2Q96DL1 559 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 RBP7Q96R05 134 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 PRSS27Q9BQR3 290 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 C1QTNF7Q9BXJ2 289 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 ACTRT3Q9BYD9 372 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 ZNF223Q9UK11 482 aaPredicted RBP18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 A0A0B4J203 849 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 G3V3Q6 166 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 MT-ND4P03905 459 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 DDX6P26196 483 aaKnown RBP eCLIP18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 CERS1P27544 350 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 BMP8BP34820 402 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 PUS10Q3MIT2 529 aaKnown RBP18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 TMEM52BQ4KMG9 183 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 HEPHL1Q6MZM0 1159 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 CNKSR3Q6P9H4 555 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 RPTNQ6XPR3 784 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 ZNF836Q6ZNA1 936 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 BMP8AQ7Z5Y6 402 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 FGD2Q7Z6J4 655 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 CMIPQ8IY22 773 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 TMIEQ8NEW7 156 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 OR4D9Q8NGE8 314 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 PTP4A1Q93096 173 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 C4orf36Q96KX1 117 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 ZNF681Q96N22 645 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 TMEM168Q9H0V1 697 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 CLEC4MQ9H2X3 399 aaPredicted RBP18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 XKR8Q9H6D3 395 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 UBQLN2Q9UHD9 624 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 SCP2D1Q9UJQ7 156 aa18.19■□□□□ 0.5
PDLIM3-212ENST00000620787 MRPL3P09001 348 aaKnown RBP18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 UGT2B7P16662 529 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 RAB3BP20337 219 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 MAKP20794 623 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 MPIP34949 423 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 ACVR1BP36896 505 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 ZNF136P52737 540 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 CLDN2P57739 230 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 PUDPQ08623 228 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 OR13C5Q8NGS8 318 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 CEP76Q8TAP6 659 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 NXPE3Q969Y0 559 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 ARMC5Q96C12 935 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 ZFP3Q96NJ6 502 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 LGR4Q9BXB1 951 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 C6orf106Q9H6K1 298 aaPredicted RBP18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 C12orf10Q9HB07 376 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 KRCC1Q9NPI7 259 aaPredicted RBP18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 SIDT1Q9NXL6 827 aaKnown RBP18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 NPFFR2Q9Y5X5 522 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 NPTNQ9Y639 398 aa18.18■□□□□ 0.5
PDLIM3-212ENST00000620787 LTBP2Q14767 1821 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms