RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 COMMD1Q8N668 190 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 SPG21Q9NZD8 308 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF726A6NNF4 738 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 EPHX1P07099 455 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ICAM2P13598 275 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ADRB3P13945 408 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 CARD17Q5XLA6 110 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 BAGE3Q86Y29 109 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 BAGE2Q86Y30 109 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 GATSQ8NAP1 163 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 ZBTB8AQ96BR9 441 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 DUS3LQ96G46 650 aaKnown RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 C12orf42Q96LP6 360 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 WNT9AO14904 365 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 FDXRP22570 491 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 SMAD2Q15796 467 aaKnown RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 Q5BKY6 102 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 EIF5AL1Q6IS14 154 aaKnown RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 FUNDC1Q8IVP5 155 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 TCTE3Q8IZS6 198 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 SCMH1Q96GD3 660 aa4.75□□□□□ -1.65
VPS13D-214ENST00000620676 UHRF1Q96T88 793 aaPredicted RBP4.75□□□□□ -1.65
VPS13D-214ENST00000620676 GABRDO14764 452 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 PRSS3P35030 304 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 CAV2P51636 162 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF136P52737 540 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 PDGFRLQ15198 375 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 GXYLT1Q4G148 440 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 PLPP5Q8NEB5 264 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ADAMTS19Q8TE59 1207 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 MYLIPQ8WY64 445 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 IMP4Q96G21 291 aaKnown RBP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 FGF4P08620 206 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 HOXB8P17481 243 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 RPL17P18621 184 aaKnown RBP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 SPOCK1Q08629 439 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 HLA-DQA1Q5Y7H0 255 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 POP5Q969H6 163 aaKnown RBP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 OCSTAMPQ9BR26 566 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 TECPR2O15040 1411 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 GABRPO00591 440 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 DVL2O14641 736 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 GPR37L1O60883 481 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 SLC2A10O95528 541 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 NDUFB7P17568 137 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 EIF5AP63241 154 aaKnown RBP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 RCAN2Q14206 197 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ARHGAP40Q5TG30 622 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 OR4N5Q8IXE1 308 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 TMEM123Q8N131 208 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 PHYHIPQ92561 330 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF583Q96ND8 569 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 SBK2P0C263 348 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 NPY4RP50391 375 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 OTPQ5XKR4 325 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 OR5M10Q6IEU7 315 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ZC3H14Q6PJT7 736 aaKnown RBP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 CCDC116Q8IYX3 515 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 TMEM145Q8NBT3 493 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 SLC30A7Q8NEW0 376 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 OR1M1Q8NGA1 313 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 OR6S1Q8NH40 331 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 THAP4Q8WY91 577 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 RBM14Q96PK6 669 aaKnown RBP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 KLHL42Q9P2K6 505 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 PTCH2Q9Y6C5 1203 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 WASH4PA8MWX3 477 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ARG1P05089 322 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 IL3P08700 152 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 SERPINA4P29622 427 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 WDR5P61964 334 aaKnown RBP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 VAMP3Q15836 100 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 BCL2A1Q16548 175 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 GPRIN1Q7Z2K8 1008 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 C6orf120Q7Z4R8 191 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 RIMKLAQ8IXN7 391 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 OR51S1Q8NGJ8 323 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 OR52I2Q8NH67 350 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 PGAP2Q9UHJ9 254 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 HYKKA2RU49 373 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 TRIM77I1YAP6 450 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 RGS13O14921 159 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 MANEAQ5SRI9 462 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 RHOUQ7L0Q8 258 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF561Q8N587 486 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ZNF300Q96RE9 604 aaPredicted RBP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 KCNH6Q9H252 994 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 DPEP2Q9H4A9 486 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 PRDM7Q9NQW5 492 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ZCWPW2A0A1B0GU75 182 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 GGT3PA6NGU5 568 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 XRCC3O43542 346 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 TACSTD2P09758 323 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 GJA4P35212 333 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 SERINC3Q13530 473 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 SLIRPQ9GZT3 109 aaKnown RBP4.74□□□□□ -1.65
VPS13D-214ENST00000620676 MROH2AA6NES4 1674 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 IQGAP1P46940 1657 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 RNASEK-C17orf49H0YIS7 233 aa4.74□□□□□ -1.65
VPS13D-214ENST00000620676 ACAA1P09110 424 aaPredicted RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms