RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	ZNF229	Q9UJW7	825 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	CCL27	Q9Y4X3	112 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	PDZD2	O15018	2839 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	NPIPB13	A6NJU9	1138 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	BBIP1	A8MTZ0	92 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	NPIPB4	C9JG80	1138 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	ATP6V1G2-DDX39B	F2Z307	99 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	hCG_2039718	K7EN88	272 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	NDUFS6	O75380	124 aa	Known RBP	4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	CIB2	O75838	187 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	PPIAL4G	P0DN37	164 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	HOXB9	P17482	250 aa	Predicted RBP	4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	PTX3	P26022	381 aa	Predicted RBP	4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	BSG	P35613	385 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	PPIC	P45877	212 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	GLRB	P48167	497 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	SNRPD2	P62316	118 aa	Known RBP	4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	KRTAP1-1	Q07627	177 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	ERV3-1	Q14264	604 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	EFNB3	Q15768	340 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	DEFB113	Q30KQ7	82 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZMAT1	Q5H9K5	638 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	REP15	Q6BDI9	236 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	C11orf71	Q6IPW1	123 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	DOK6	Q6PKX4	331 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	SEM1	Q6ZVN7	128 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	RPS19BP1	Q86WX3	136 aa	Known RBP	4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	PTRH1	Q86Y79	214 aa	Known RBP	4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZNF611	Q8N823	705 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	SPERT	Q8NA61	448 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	PAPD5	Q8NDF8	572 aa	Known RBP	4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	ICA1L	Q8NDH6	482 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	PPP1R14C	Q8TAE6	165 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	BLOC1S5	Q8TDH9	187 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	RND1	Q92730	232 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	ROPN1L	Q96C74	230 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	RCN3	Q96D15	328 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	DPH7	Q9BTV6	452 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	G6PC3	Q9BUM1	346 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	CD244	Q9BZW8	370 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	RBM38	Q9H0Z9	239 aa	Known RBP	4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	SERHL2	Q9H4I8	314 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	PRDM13	Q9H4Q3	707 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	EML4	Q9HC35	981 aa	Known RBP	4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	TBC1D23	Q9NUY8	699 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	ARMC1	Q9NVT9	282 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	PRODH2	Q9UF12	536 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	RAB26	Q9ULW5	256 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	GPR52	Q9Y2T5	361 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	GPR55	Q9Y2T6	319 aa	Predicted RBP	4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	WDFY4	Q6ZS81	3184 aa		4.91	□□□□□ -1.62
CBWD3-215	ENST00000619322	OR51F1	A6NGY5	319 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	GABRR3	A8MPY1	467 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	NPIPB9	F8W1W9	429 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	DLGAP1	O14490	977 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	AP3D1	O14617	1153 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	NDUFS3	O75489	264 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	PPM1B	O75688	479 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	MT-ND1	P03886	318 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	HRG	P04196	525 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	PEPD	P12955	493 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	PRKCA	P17252	672 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	PSMB1	P20618	241 aa	Known RBP	4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	S100A1	P23297	94 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	ACVR2A	P27037	513 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	TGFBR1	P36897	503 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	RPL3	P39023	403 aa	Known RBP	4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	NUP107	P57740	925 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	PPP2R2B	Q00005	443 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	PLIN5	Q00G26	463 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	EBP	Q15125	230 aa	Known RBP	4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	C3AR1	Q16581	482 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	ARSK	Q6UWY0	536 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	PQLC1	Q8N2U9	271 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	BPIFB6	Q8NFQ5	453 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	PPP1R14A	Q96A00	147 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZMYND19	Q96E35	227 aa	Predicted RBP	4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZNF597	Q96LX8	424 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	SYT3	Q9BQG1	590 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	TTTY12	Q9BZ98	90 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	HOXD1	Q9GZZ0	328 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	NARFL	Q9H6Q4	476 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZNF696	Q9H7X3	374 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	WDR41	Q9HAD4	459 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	MYNN	Q9NPC7	610 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	SOHLH2	Q9NX45	425 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	CTSF	Q9UBX1	484 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	PCTP	Q9UKL6	214 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	DTNA	Q9Y4J8	743 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	PCDHA9	Q9Y5H5	950 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	GPR45	Q9Y5Y3	372 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322		V9GYQ6	96 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	MAP1B	P46821	2468 aa	Known RBP	4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	PPIAL4E	A0A075B759	164 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	PPIAL4C	A0A0B4J2A2	164 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	TCRBV5S2	A0A599	114 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	PPIAL4D	F5H284	164 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	ANKRD28	O15084	1053 aa		4.9	□□□□□ -1.62
CBWD3-215	ENST00000619322	KLF4	O43474	513 aa		4.9	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms