RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 PRMT6Q96LA8 375 aaPredicted RBP14.22□□□□□ -0.13
COL5A1-208ENST00000618395 CD244Q9BZW8 370 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 MED16Q9Y2X0 877 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 VIPR1P32241 457 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 PREPP48147 710 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 CDK5Q00535 292 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 SNTB1Q13884 538 aaKnown RBP14.22□□□□□ -0.13
COL5A1-208ENST00000618395 FYTTD1Q96QD9 318 aaKnown RBP14.22□□□□□ -0.13
COL5A1-208ENST00000618395 MACROD1Q9BQ69 325 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 PDE7BQ9NP56 450 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 FKBPLQ9UIM3 349 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 HEMK1Q9Y5R4 338 aaPredicted RBP14.22□□□□□ -0.13
COL5A1-208ENST00000618395 HAS3O00219 553 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 PDGFBP01127 241 aaPredicted RBP14.22□□□□□ -0.13
COL5A1-208ENST00000618395 HTR2CP28335 458 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 UBE2G2P60604 165 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 LY6KQ17RY6 165 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 PRAMEF14Q5SWL7 426 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 ZNF34Q8IZ26 560 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 BCAS3Q9H6U6 928 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 EXOSC3Q9NQT5 275 aaKnown RBP14.22□□□□□ -0.13
COL5A1-208ENST00000618395 BRWD1Q9NSI6 2320 aa14.22□□□□□ -0.13
COL5A1-208ENST00000618395 TMEM150CB9EJG8 249 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 CTDSP2O14595 271 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 PRDX3P30048 256 aaKnown RBP14.21□□□□□ -0.13
COL5A1-208ENST00000618395 GRPRP30550 384 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 RFC3P40938 356 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 TMEM220Q6QAJ8 160 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 PRSS42Q7Z5A4 293 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 OR6N1Q8NGY5 312 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 NOL4LQ96MY1 436 aaPredicted RBP14.21□□□□□ -0.13
COL5A1-208ENST00000618395 TSSK2Q96PF2 358 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 ANKRD28O15084 1053 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 CILP2Q8IUL8 1156 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 SLC38A6Q8IZM9 456 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 GCNT2Q8N0V5 402 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 IMP4Q96G21 291 aaKnown RBP14.21□□□□□ -0.13
COL5A1-208ENST00000618395 ZDHHC5Q9C0B5 715 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 C11orf54Q9H0W9 315 aaPredicted RBP14.21□□□□□ -0.13
COL5A1-208ENST00000618395 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.21□□□□□ -0.13
COL5A1-208ENST00000618395 TARBP1Q13395 1621 aaKnown RBP14.21□□□□□ -0.13
COL5A1-208ENST00000618395 LOC730098B7Z3J9 87 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 H7BYZ3 331 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 SPATA31D3P0C874 917 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 SPATA31D4Q6ZUB0 917 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 SLC35B2Q8TB61 432 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 MR1Q95460 341 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 LIPT1Q9Y234 373 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 TGFB1I1O43294 461 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 TCRBP04435 133 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 CBLP22681 906 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 TESK1Q15569 626 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 LPCAT3Q6P1A2 487 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 CDH26Q8IXH8 852 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 REM2Q8IYK8 340 aaPredicted RBP14.21□□□□□ -0.13
COL5A1-208ENST00000618395 SLC38A3Q99624 504 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 MRPL17Q9NRX2 175 aaKnown RBP14.21□□□□□ -0.13
COL5A1-208ENST00000618395 C2CD4BA6NLJ0 364 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 C5AR1P21730 350 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 TNFSF9P41273 254 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 ACSM3Q53FZ2 586 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 CHADLQ6NUI6 762 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 SLC22A18Q96BI1 424 aa14.21□□□□□ -0.13
COL5A1-208ENST00000618395 TPRP12270 2363 aaKnown RBP14.21□□□□□ -0.14
COL5A1-208ENST00000618395 ZIC2O95409 532 aaPredicted RBP14.21□□□□□ -0.14
COL5A1-208ENST00000618395 RPL7P18124 248 aaKnown RBP14.21□□□□□ -0.14
COL5A1-208ENST00000618395 DGKZQ13574 1117 aa14.21□□□□□ -0.14
COL5A1-208ENST00000618395 GGNBP1Q5YKI7 109 aa14.21□□□□□ -0.14
COL5A1-208ENST00000618395 BPIFB2Q8N4F0 458 aa14.21□□□□□ -0.14
COL5A1-208ENST00000618395 RELL2Q8NC24 303 aaPredicted RBP14.21□□□□□ -0.14
COL5A1-208ENST00000618395 OR51A7Q8NH64 312 aa14.21□□□□□ -0.14
COL5A1-208ENST00000618395 CWH43Q9H720 699 aa14.21□□□□□ -0.14
COL5A1-208ENST00000618395 TERTO14746 1132 aaKnown RBP14.21□□□□□ -0.14
COL5A1-208ENST00000618395 S100A7P31151 101 aa14.21□□□□□ -0.14
COL5A1-208ENST00000618395 SEC61A1P61619 476 aaKnown RBP14.21□□□□□ -0.14
COL5A1-208ENST00000618395 KRTCAP2Q8N6L1 136 aa14.21□□□□□ -0.14
COL5A1-208ENST00000618395 GPR148Q8TDV2 347 aa14.21□□□□□ -0.14
COL5A1-208ENST00000618395 SFT2D1Q8WV19 159 aa14.21□□□□□ -0.14
COL5A1-208ENST00000618395 SPRYD4Q8WW59 207 aaPredicted RBP14.21□□□□□ -0.14
COL5A1-208ENST00000618395 IQSEC2Q5JU85 1478 aa14.21□□□□□ -0.14
COL5A1-208ENST00000618395 LTN1O94822 1766 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 OR2F2O95006 317 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 GLAP06280 429 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 OR12D1P0DN82 309 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 KCNE1P15382 129 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 PTBP1P26599 531 aaKnown RBP eCLIP14.2□□□□□ -0.14
COL5A1-208ENST00000618395 OR2F1Q13607 317 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 GPR176Q14439 515 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 MBTPS1Q14703 1052 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 ZNF610Q8N9Z0 462 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 ZNF514Q96K75 400 aaPredicted RBP14.2□□□□□ -0.14
COL5A1-208ENST00000618395 PDGFDQ9GZP0 370 aaPredicted RBP14.2□□□□□ -0.14
COL5A1-208ENST00000618395 ABI3Q9P2A4 366 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 A8MVM7 634 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 MSX1P28360 303 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 BDKRB1P46663 353 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 RPL29P47914 159 aaKnown RBP14.2□□□□□ -0.14
COL5A1-208ENST00000618395 DIO3P55073 304 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 PER3P56645 1201 aa14.2□□□□□ -0.14
COL5A1-208ENST00000618395 ZNF620Q6ZNG0 422 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms