RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 RTN4RQ9BZR6 473 aa6.84□□□□□ -1.31
VPS45-213ENST00000618148 POLR2J2Q9GZM3 115 aaKnown RBP6.84□□□□□ -1.31
VPS45-213ENST00000618148 POLR2J3Q9H1A7 115 aaKnown RBP6.84□□□□□ -1.31
VPS45-213ENST00000618148 RASSF4Q9H2L5 321 aa6.84□□□□□ -1.31
VPS45-213ENST00000618148 ARMC7Q9H6L4 198 aa6.84□□□□□ -1.31
VPS45-213ENST00000618148 CPNE5Q9HCH3 593 aa6.84□□□□□ -1.31
VPS45-213ENST00000618148 RLIMQ9NVW2 624 aa6.84□□□□□ -1.31
VPS45-213ENST00000618148 KLHL28Q9NXS3 571 aa6.84□□□□□ -1.31
VPS45-213ENST00000618148 C6orf203Q9P0P8 240 aaPredicted RBP6.84□□□□□ -1.31
VPS45-213ENST00000618148 CNOT11Q9UKZ1 510 aaKnown RBP6.84□□□□□ -1.31
VPS45-213ENST00000618148 AURKCQ9UQB9 309 aa6.84□□□□□ -1.31
VPS45-213ENST00000618148 SH3GLB1Q9Y371 365 aa6.84□□□□□ -1.31
VPS45-213ENST00000618148 V9GYQ6 96 aa6.84□□□□□ -1.31
VPS45-213ENST00000618148 CFAP47Q6ZTR5 3102 aa6.84□□□□□ -1.31
VPS45-213ENST00000618148 H3BNH8 94 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 K7ENP7 123 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 M0R3H8 397 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 ETV2O00321 342 aaPredicted RBP6.84□□□□□ -1.32
VPS45-213ENST00000618148 TP53I11O14683 189 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 FFAR1O14842 300 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 CASQ2O14958 399 aaPredicted RBP6.84□□□□□ -1.32
VPS45-213ENST00000618148 EIF4E2O60573 245 aaKnown RBP6.84□□□□□ -1.32
VPS45-213ENST00000618148 TPST2O60704 377 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 ADAM11O75078 769 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 DEAF1O75398 565 aaPredicted RBP6.84□□□□□ -1.32
VPS45-213ENST00000618148 TIPRLO75663 272 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 CSTAP01040 98 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 FABP3P05413 133 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 UBL4AP11441 157 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 ANPEPP15144 967 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 ITGA2P17301 1181 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 RHCEP18577 417 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 TNFRSF1BP20333 461 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 FASP25445 335 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 ITGA3P26006 1051 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 CASP3P42574 277 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 OR1E2P47887 323 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 LIMS1P48059 325 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 UCNP55089 124 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 DLX5P56178 289 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 MFAP5Q13361 173 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 ABHD17BQ5VST6 288 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 INO80CQ6PI98 192 aaPredicted RBP6.84□□□□□ -1.32
VPS45-213ENST00000618148 ISLR2Q6UXK2 745 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 RTL4Q6ZR62 310 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 HMGN2P46Q86SG4 172 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 TSPYL5Q86VY4 417 aaPredicted RBP6.84□□□□□ -1.32
VPS45-213ENST00000618148 BEST3Q8N1M1 668 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 LSMEM1Q8N8F7 131 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 ASB15Q8WXK1 588 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 NR4A3Q92570 626 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 ARSGQ96EG1 525 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 CENPNQ96H22 339 aaPredicted RBP6.84□□□□□ -1.32
VPS45-213ENST00000618148 POM121Q96HA1 1249 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 ZNF347Q96SE7 839 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 ANGPTL4Q9BY76 406 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 TBL1XR1Q9BZK7 514 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 AMBRA1Q9C0C7 1298 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 LAT2Q9GZY6 243 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 ZNF552Q9H707 407 aaPredicted RBP6.84□□□□□ -1.32
VPS45-213ENST00000618148 PROK2Q9HC23 129 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 ZBTB20Q9HC78 741 aaPredicted RBP6.84□□□□□ -1.32
VPS45-213ENST00000618148 CNIH4Q9P003 139 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 DNAJB9Q9UBS3 223 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 NKX1-2Q9UD57 310 aaPredicted RBP6.84□□□□□ -1.32
VPS45-213ENST00000618148 TESQ9UGI8 421 aaKnown RBP6.84□□□□□ -1.32
VPS45-213ENST00000618148 ICAM5Q9UMF0 924 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 A4GNTQ9UNA3 340 aa6.84□□□□□ -1.32
VPS45-213ENST00000618148 CNTRLQ7Z7A1 2325 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 NINQ8N4C6 2090 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 A0A1W2PRQ8 180 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 MED19A0JLT2 244 aaPredicted RBP6.83□□□□□ -1.32
VPS45-213ENST00000618148 B4DXG7 233 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 CLOCKO15516 846 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 RRP8O43159 456 aaKnown RBP6.83□□□□□ -1.32
VPS45-213ENST00000618148 ZNF264O43296 627 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 OIP5O43482 229 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 NEURL1O76050 574 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 ANGPTL1O95841 491 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 LDLRP01130 860 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 MT-ND1P03886 318 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 THRBP10828 461 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 PRG2P13727 222 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 HPGDP15428 266 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 HTR2AP28223 471 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 GCKP35557 465 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 CYB561P49447 251 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 HMGA2P52926 109 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 SUMO3P55854 103 aaPredicted RBP6.83□□□□□ -1.32
VPS45-213ENST00000618148 RGS8P57771 180 aaPredicted RBP6.83□□□□□ -1.32
VPS45-213ENST00000618148 RPP38P78345 283 aaKnown RBP6.83□□□□□ -1.32
VPS45-213ENST00000618148 ZNF117Q03924 483 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 EPS8Q12929 822 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 TUBA3CQ13748 450 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 DGCR6Q14129 220 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 AGAP7PQ5VUJ5 663 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 OR2T5Q6IEZ7 315 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 HMBOX1Q6NT76 420 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 SLC30A6Q6NXT4 461 aa6.83□□□□□ -1.32
VPS45-213ENST00000618148 TUBA3EQ6PEY2 450 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms