RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 PDZK1Q5T2W1 519 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 MRPL2Q5T653 305 aaKnown RBP10.49□□□□□ -0.73
SLIRP-212ENST00000613856 HMBOX1Q6NT76 420 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 TCTN3Q6NUS6 607 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 H3F3CQ6NXT2 135 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 LYPD8Q6UX82 237 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 ASB18Q6ZVZ8 466 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 COMTD1Q86VU5 262 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 CARM1Q86X55 608 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 GRAMD2AQ8IUY3 354 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 DND1Q8IYX4 353 aaKnown RBP10.49□□□□□ -0.73
SLIRP-212ENST00000613856 PRR22Q8IZ63 422 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 SLC5A8Q8N695 610 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 AMER2Q8N7J2 671 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 RNF138Q8WVD3 245 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 LRTOMTQ8WZ04 291 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 CENPNQ96H22 339 aaPredicted RBP10.49□□□□□ -0.73
SLIRP-212ENST00000613856 FER1L6-AS2Q96M78 137 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 ZNF347Q96SE7 839 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 ARMC7Q9H6L4 198 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 UBQLN4Q9NRR5 601 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.49□□□□□ -0.73
SLIRP-212ENST00000613856 NDUFAF4Q9P032 175 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 DNAJB9Q9UBS3 223 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 SLC13A4Q9UKG4 626 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 SH3GLB1Q9Y371 365 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 DTNAQ9Y4J8 743 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 ENPP4Q9Y6X5 453 aa10.49□□□□□ -0.73
SLIRP-212ENST00000613856 RP1L1Q8IWN7 2480 aaPredicted RBP10.49□□□□□ -0.73
SLIRP-212ENST00000613856 TTLL8A6PVC2 850 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 WWP2O00308 870 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 CLOCKO15516 846 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 ZNF354AO60765 605 aaPredicted RBP10.48□□□□□ -0.73
SLIRP-212ENST00000613856 OXSR1O95747 527 aaPredicted RBP10.48□□□□□ -0.73
SLIRP-212ENST00000613856 CST1P01037 141 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 MT-ND1P03886 318 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 ITGAMP11215 1152 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 TNFRSF1BP20333 461 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 TBXA2RP21731 343 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 MLF1P58340 268 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 PLAURQ03405 335 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 GK3PQ14409 553 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 EIF2S3LQ2VIR3 472 aaKnown RBP10.48□□□□□ -0.73
SLIRP-212ENST00000613856 GRAMD1BQ3KR37 738 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 KLHL26Q53HC5 615 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 DCAF10Q5QP82 559 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 FNDC7Q5VTL7 733 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 TSEN54Q7Z6J9 526 aaKnown RBP10.48□□□□□ -0.73
SLIRP-212ENST00000613856 HMGN2P46Q86SG4 172 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 FAM71CQ8NEG0 241 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 OR4C3Q8NH37 302 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 CPT1CQ8TCG5 803 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 THAP4Q8WY91 577 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 NR4A3Q92570 626 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 HGDQ93099 445 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 ZNF300Q96RE9 604 aaPredicted RBP10.48□□□□□ -0.73
SLIRP-212ENST00000613856 RASL10BQ96S79 203 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 ADOQ96SZ5 270 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 BDH2Q9BUT1 245 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 AMBRA1Q9C0C7 1298 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 POLR2J2Q9GZM3 115 aaKnown RBP10.48□□□□□ -0.73
SLIRP-212ENST00000613856 POLR2J3Q9H1A7 115 aaKnown RBP10.48□□□□□ -0.73
SLIRP-212ENST00000613856 ACAD8Q9UKU7 415 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 ABCG2Q9UNQ0 655 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 SLC35A3Q9Y2D2 325 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 YARS2Q9Y2Z4 477 aaKnown RBP10.48□□□□□ -0.73
SLIRP-212ENST00000613856 CSMD2Q7Z408 3487 aa10.48□□□□□ -0.73
SLIRP-212ENST00000613856 HEATR5AQ86XA9 2040 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 SERINC4A6NH21 518 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 ALG1L2C9J202 215 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 hCG_2039718K7EN88 272 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 M0R3H8 397 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 SCDO00767 359 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 ADAMDEC1O15204 470 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 FMO6PO60774 539 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 ICOSLGO75144 302 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 UGT2B11O75310 529 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 ITGA10O75578 1167 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 OR2J2O76002 312 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 RHCEP18577 417 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 ENDOUP21128 410 aaKnown RBP10.47□□□□□ -0.73
SLIRP-212ENST00000613856 OR1E2P47887 323 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 RGS8P57771 180 aaPredicted RBP10.47□□□□□ -0.73
SLIRP-212ENST00000613856 SESN3P58005 492 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 AIMP2Q13155 320 aaKnown RBP10.47□□□□□ -0.73
SLIRP-212ENST00000613856 NPTX1Q15818 432 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 NTRK2Q16620 822 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 OGFRL1Q5TC84 451 aaPredicted RBP10.47□□□□□ -0.73
SLIRP-212ENST00000613856 OR2T5Q6IEZ7 315 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 TMEM81Q6P7N7 255 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 OPN5Q6U736 354 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 C16orf47Q6ZP98 133 aaPredicted RBP10.47□□□□□ -0.73
SLIRP-212ENST00000613856 NUP54Q7Z3B4 507 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 CYP4Z1Q86W10 505 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 RPS19BP1Q86WX3 136 aaKnown RBP10.47□□□□□ -0.73
SLIRP-212ENST00000613856 CLIP4Q8N3C7 705 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 GALNT11Q8NCW6 608 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 OR4D11Q8NGI4 311 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 OR2T29Q8NH02 315 aa10.47□□□□□ -0.73
SLIRP-212ENST00000613856 THAP3Q8WTV1 239 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms