RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 DSCR3O14972 297 aa10.15□□□□□ -0.79
FAM3A-221ENST00000612856 ALOX12BO75342 701 aa10.15□□□□□ -0.79
FAM3A-221ENST00000612856 GKN3PP0CG01 181 aa10.15□□□□□ -0.79
FAM3A-221ENST00000612856 GRK5P34947 590 aa10.15□□□□□ -0.79
FAM3A-221ENST00000612856 CASRP41180 1078 aa10.15□□□□□ -0.79
FAM3A-221ENST00000612856 GZMKP49863 264 aa10.15□□□□□ -0.79
FAM3A-221ENST00000612856 KHKP50053 298 aa10.15□□□□□ -0.79
FAM3A-221ENST00000612856 B4GALNT1Q00973 533 aa10.15□□□□□ -0.79
FAM3A-221ENST00000612856 PROX2Q3B8N5 592 aa10.15□□□□□ -0.79
FAM3A-221ENST00000612856 GUSBP11Q6P575 273 aa10.15□□□□□ -0.79
FAM3A-221ENST00000612856 NAGSQ8N159 534 aa10.15□□□□□ -0.79
FAM3A-221ENST00000612856 CREB3L4Q8TEY5 395 aa10.15□□□□□ -0.79
FAM3A-221ENST00000612856 GGHQ92820 318 aa10.15□□□□□ -0.79
FAM3A-221ENST00000612856 HYLS1Q96M11 299 aa10.15□□□□□ -0.79
FAM3A-221ENST00000612856 OR2A14Q96R47 310 aa10.15□□□□□ -0.79
FAM3A-221ENST00000612856 ZDHHC5Q9C0B5 715 aa10.15□□□□□ -0.79
FAM3A-221ENST00000612856 KLHL31Q9H511 634 aa10.15□□□□□ -0.79
FAM3A-221ENST00000612856 NFKBIL1Q9UBC1 381 aaPredicted RBP10.15□□□□□ -0.79
FAM3A-221ENST00000612856 CLCA1A8K7I4 914 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 PRSS23O95084 383 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 NPPBP16860 134 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 M6PRP20645 277 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 RPS19P39019 145 aaKnown RBP10.14□□□□□ -0.79
FAM3A-221ENST00000612856 RFC3P40938 356 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 GPR85P60893 370 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 BPTFQ12830 3046 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 CHAF1BQ13112 559 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 CARD17Q5XLA6 110 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.14□□□□□ -0.794e-6■■□□□ 13.3
FAM3A-221ENST00000612856 SIRT6Q8N6T7 355 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 CHAC2Q8WUX2 184 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 CCNL2Q96S94 520 aaPredicted RBP10.14□□□□□ -0.79
FAM3A-221ENST00000612856 DUSP23Q9BVJ7 150 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 DMRT3Q9NQL9 472 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 TRPS1Q9UHF7 1281 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 PIKFYVEQ9Y2I7 2098 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 A0A0G2JMP0 313 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 DUXAA6NLW8 204 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 E2F3O00716 465 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 ZNF749O43361 778 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 SLC22A5O76082 557 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 HOXB3P14651 431 aaPredicted RBP10.14□□□□□ -0.79
FAM3A-221ENST00000612856 PSMD4P55036 377 aaKnown RBP10.14□□□□□ -0.79
FAM3A-221ENST00000612856 ACY1Q03154 408 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 METRNLQ641Q3 311 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 CPZQ66K79 652 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 BICRALQ6AI39 1079 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 SLC46A3Q7Z3Q1 461 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 KCTD20Q7Z5Y7 419 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 PTRH1Q86Y79 214 aaKnown RBP10.14□□□□□ -0.79
FAM3A-221ENST00000612856 LGI4Q8N135 537 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 BOLLQ8N9W6 283 aaKnown RBP10.14□□□□□ -0.79
FAM3A-221ENST00000612856 OR51L1Q8NGJ5 315 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 DNAJA4Q8WW22 397 aaPredicted RBP10.14□□□□□ -0.79
FAM3A-221ENST00000612856 FBXW5Q969U6 566 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 L3HYPDHQ96EM0 354 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 TIMM29Q9BSF4 260 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 POLR2J3Q9H1A7 115 aaKnown RBP10.14□□□□□ -0.79
FAM3A-221ENST00000612856 FANCFQ9NPI8 374 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 ACOXLQ9NUZ1 547 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 LEUTXA8MZ59 168 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 B4DXG7 233 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 UPK1AO00322 258 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 ADAMDEC1O15204 470 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 NUDT7P0C024 238 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 ITGA1P56199 1179 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 ZNF33BQ06732 778 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 GPR50Q13585 617 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 IQCCQ4KMZ1 466 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.14□□□□□ -0.79
FAM3A-221ENST00000612856 SAMD14Q8IZD0 417 aaPredicted RBP10.14□□□□□ -0.79
FAM3A-221ENST00000612856 ZNF548Q8NEK5 533 aaPredicted RBP10.14□□□□□ -0.79
FAM3A-221ENST00000612856 DAZLQ92904 295 aaKnown RBP10.14□□□□□ -0.79
FAM3A-221ENST00000612856 METTL2AQ96IZ6 378 aaKnown RBP10.14□□□□□ -0.79
FAM3A-221ENST00000612856 MCCC1Q96RQ3 725 aaPredicted RBP10.14□□□□□ -0.79
FAM3A-221ENST00000612856 MCHR1Q99705 422 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 CUTCQ9NTM9 273 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 VNN3Q9NY84 501 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 UBQLN2Q9UHD9 624 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 PFDN2Q9UHV9 154 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 PCDHGB2Q9Y5G2 931 aa10.14□□□□□ -0.79
FAM3A-221ENST00000612856 SPAARA0A1B0GVQ0 90 aa10.13□□□□□ -0.79
FAM3A-221ENST00000612856 GABRR3A8MPY1 467 aa10.13□□□□□ -0.79
FAM3A-221ENST00000612856 M0R233 179 aa10.13□□□□□ -0.79
FAM3A-221ENST00000612856 PSMD9O00233 223 aa10.13□□□□□ -0.79
FAM3A-221ENST00000612856 LCMT2O60294 686 aaKnown RBP10.13□□□□□ -0.79
FAM3A-221ENST00000612856 HIST1H1TP22492 207 aaPredicted RBP10.13□□□□□ -0.79
FAM3A-221ENST00000612856 GRK6P43250 576 aa10.13□□□□□ -0.79
FAM3A-221ENST00000612856 GSTM5P46439 218 aa10.13□□□□□ -0.79
FAM3A-221ENST00000612856 CCL11P51671 97 aa10.13□□□□□ -0.79
FAM3A-221ENST00000612856 KIR2DS3Q14952 304 aa10.13□□□□□ -0.79
FAM3A-221ENST00000612856 P4HA3Q7Z4N8 544 aa10.13□□□□□ -0.79
FAM3A-221ENST00000612856 RIMKLAQ8IXN7 391 aa10.13□□□□□ -0.79
FAM3A-221ENST00000612856 OR8K3Q8NH51 312 aa10.13□□□□□ -0.79
FAM3A-221ENST00000612856 IFI44Q8TCB0 444 aa10.13□□□□□ -0.79
FAM3A-221ENST00000612856 BMFQ96LC9 184 aa10.13□□□□□ -0.79
FAM3A-221ENST00000612856 PTGFRNQ9P2B2 879 aa10.13□□□□□ -0.79
FAM3A-221ENST00000612856 ZNF225Q9UK10 706 aa10.13□□□□□ -0.79
FAM3A-221ENST00000612856 TBC1D24Q9ULP9 559 aa10.13□□□□□ -0.79
FAM3A-221ENST00000612856 PCDHGA2Q9Y5H1 932 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms