RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 CHDHQ8NE62 594 aaPredicted RBP16.37■□□□□ 0.21
VCX3A-203ENST00000612369 LINC01560Q8TB33 94 aa16.37■□□□□ 0.21
VCX3A-203ENST00000612369 MIPOL1Q8TD10 442 aa16.37■□□□□ 0.21
VCX3A-203ENST00000612369 ZNF845Q96IR2 970 aaPredicted RBP16.37■□□□□ 0.21
VCX3A-203ENST00000612369 RNF145Q96MT1 663 aa16.37■□□□□ 0.21
VCX3A-203ENST00000612369 SDF2Q99470 211 aa16.37■□□□□ 0.21
VCX3A-203ENST00000612369 NDRG3Q9UGV2 375 aa16.37■□□□□ 0.21
VCX3A-203ENST00000612369 DTNAQ9Y4J8 743 aa16.37■□□□□ 0.21
VCX3A-203ENST00000612369 AKAP9Q99996 3911 aa16.37■□□□□ 0.21
VCX3A-203ENST00000612369 RNF103-CHMP3A0A140T963 221 aa16.36■□□□□ 0.21
VCX3A-203ENST00000612369 TRPC5OSA6NMA1 111 aa16.36■□□□□ 0.21
VCX3A-203ENST00000612369 SLCO1B7G3V0H7 640 aa16.36■□□□□ 0.21
VCX3A-203ENST00000612369 GTPBP1O00178 669 aaKnown RBP16.36■□□□□ 0.21
VCX3A-203ENST00000612369 SMNDC1O75940 238 aaKnown RBP eCLIP16.36■□□□□ 0.21
VCX3A-203ENST00000612369 GUSBP08236 651 aa16.36■□□□□ 0.21
VCX3A-203ENST00000612369 LINGO3P0C6S8 592 aa16.36■□□□□ 0.21
VCX3A-203ENST00000612369 CD8BP10966 210 aa16.36■□□□□ 0.21
VCX3A-203ENST00000612369 UQCRC2P22695 453 aa16.36■□□□□ 0.21
VCX3A-203ENST00000612369 ELK4P28324 431 aa16.36■□□□□ 0.21
VCX3A-203ENST00000612369 EIF1AXP47813 144 aaKnown RBP16.36■□□□□ 0.21
VCX3A-203ENST00000612369 ATG16L1Q676U5 607 aa16.36■□□□□ 0.21
VCX3A-203ENST00000612369 VWA1Q6PCB0 445 aa16.36■□□□□ 0.21
VCX3A-203ENST00000612369 SPATA19Q7Z5L4 167 aa16.36■□□□□ 0.21
VCX3A-203ENST00000612369 OR5D16Q8NGK9 328 aa16.36■□□□□ 0.21
VCX3A-203ENST00000612369 OR4A15Q8NGL6 344 aa16.36■□□□□ 0.21
VCX3A-203ENST00000612369 OIT3Q8WWZ8 545 aa16.36■□□□□ 0.21
VCX3A-203ENST00000612369 ADGRG7Q96K78 797 aa16.36■□□□□ 0.21
VCX3A-203ENST00000612369 SLC35G5Q96KT7 338 aa16.36■□□□□ 0.21
VCX3A-203ENST00000612369 PRRG4Q9BZD6 226 aa16.36■□□□□ 0.21
VCX3A-203ENST00000612369 NMUR2Q9GZQ4 415 aa16.36■□□□□ 0.21
VCX3A-203ENST00000612369 EXD2Q9NVH0 621 aa16.36■□□□□ 0.21
VCX3A-203ENST00000612369 ELOVL5Q9NYP7 299 aa16.36■□□□□ 0.21
VCX3A-203ENST00000612369 MCTS1Q9ULC4 181 aaKnown RBP16.36■□□□□ 0.21
VCX3A-203ENST00000612369 ICAM5Q9UMF0 924 aa16.36■□□□□ 0.21
VCX3A-203ENST00000612369 HDAC3O15379 428 aa16.35■□□□□ 0.21
VCX3A-203ENST00000612369 EIF4E2O60573 245 aaKnown RBP16.35■□□□□ 0.21
VCX3A-203ENST00000612369 SNNO75324 88 aaPredicted RBP16.35■□□□□ 0.21
VCX3A-203ENST00000612369 STX11O75558 287 aa16.35■□□□□ 0.21
VCX3A-203ENST00000612369 CD1EP15812 388 aa16.35■□□□□ 0.21
VCX3A-203ENST00000612369 CASP8Q14790 479 aa16.35■□□□□ 0.21
VCX3A-203ENST00000612369 GUSBP1Q15486 140 aa16.35■□□□□ 0.21
VCX3A-203ENST00000612369 CTU2Q2VPK5 515 aaKnown RBP16.35■□□□□ 0.21
VCX3A-203ENST00000612369 ARHGAP11BQ3KRB8 267 aa16.35■□□□□ 0.21
VCX3A-203ENST00000612369 BEND6Q5SZJ8 279 aaPredicted RBP16.35■□□□□ 0.21
VCX3A-203ENST00000612369 CBLN3Q6UW01 205 aa16.35■□□□□ 0.21
VCX3A-203ENST00000612369 FAM214BQ7L5A3 538 aa16.35■□□□□ 0.21
VCX3A-203ENST00000612369 BTLAQ7Z6A9 289 aa16.35■□□□□ 0.21
VCX3A-203ENST00000612369 CDC20BQ86Y33 519 aa16.35■□□□□ 0.21
VCX3A-203ENST00000612369 TOR1AIP2Q8NFQ8 470 aa16.35■□□□□ 0.21
VCX3A-203ENST00000612369 OR10D3Q8NH80 312 aa16.35■□□□□ 0.21
VCX3A-203ENST00000612369 POC1BQ8TC44 478 aa16.35■□□□□ 0.21
VCX3A-203ENST00000612369 ZBTB9Q96C00 473 aa16.35■□□□□ 0.21
VCX3A-203ENST00000612369 SLC39A3Q9BRY0 314 aa16.35■□□□□ 0.21
VCX3A-203ENST00000612369 TMBIM4Q9HC24 238 aa16.35■□□□□ 0.21
VCX3A-203ENST00000612369 GLRX2Q9NS18 164 aa16.35■□□□□ 0.21
VCX3A-203ENST00000612369 NKIRAS1Q9NYS0 192 aa16.35■□□□□ 0.21
VCX3A-203ENST00000612369 CARD8Q9Y2G2 431 aa16.35■□□□□ 0.21
VCX3A-203ENST00000612369 GPC6Q9Y625 555 aaPredicted RBP16.35■□□□□ 0.21
VCX3A-203ENST00000612369 CELSR1Q9NYQ6 3014 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 NPIPA5A0A0B4J1W7 369 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 SH3D21A4FU49 640 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 GJE1A6NN92 205 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 E9PBE3 544 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 NPIPA7E9PJI5 369 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 SDHDO14521 159 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 CASKO14936 926 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 ZNF264O43296 627 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 SYNGR4O95473 234 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 CPSF4O95639 269 aaKnown RBP16.34■□□□□ 0.21
VCX3A-203ENST00000612369 NUDT14O95848 222 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 CGAP01215 116 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 NPIPA8P0DM63 369 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 S100A3P33764 101 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 CPOXP36551 454 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 CD79BP40259 229 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 MAGOHP61326 146 aaKnown RBP16.34■□□□□ 0.21
VCX3A-203ENST00000612369 RPS26P62854 115 aaKnown RBP16.34■□□□□ 0.21
VCX3A-203ENST00000612369 PHC1P78364 1004 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 LRRC74AQ0VAA2 488 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 ZNF141Q15928 474 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 SPANXN4Q5MJ08 99 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.34■□□□□ 0.21
VCX3A-203ENST00000612369 ATAD3BQ5T9A4 648 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 FBXW10Q5XX13 1052 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 AP1ARQ63HQ0 302 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 GTF2IRD2BQ6EKJ0 949 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 HEPHL1Q6MZM0 1159 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 GTF2IRD2Q86UP8 949 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 LILRA2Q8N149 483 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 OR2V1Q8NHB1 315 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 TLCD1Q96CP7 247 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 ARSGQ96EG1 525 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 GMPPAQ96IJ6 420 aaPredicted RBP16.34■□□□□ 0.21
VCX3A-203ENST00000612369 KLHL15Q96M94 604 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 NPAS1Q99742 590 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 OR51I1Q9H343 314 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 SERHL2Q9H4I8 314 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 POLE3Q9NRF9 147 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 AIG1Q9NVV5 245 aa16.34■□□□□ 0.21
VCX3A-203ENST00000612369 BTNL2Q9UIR0 455 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms