RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 C12orf73Q69YU5 71 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 HEPHL1Q6MZM0 1159 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 SFXN4Q6P4A7 337 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 C11orf88Q6PI97 169 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 APOOLQ6UXV4 268 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 DPPA4Q7L190 304 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 TECPR1Q7Z6L1 1165 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 MON1AQ86VX9 555 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 FAM71CQ8NEG0 241 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 OR4D9Q8NGE8 314 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 OR5T3Q8NGG3 340 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 PXYLP1Q8TE99 480 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 HIST1H2BAQ96A08 127 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 TEFMQ96QE5 360 aaKnown RBP11.74□□□□□ -0.53
CTCFL-218ENST00000608440 ZNF471Q9BX82 626 aaPredicted RBP11.74□□□□□ -0.53
CTCFL-218ENST00000608440 KLHL31Q9H511 634 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 HMX1Q9NP08 348 aaPredicted RBP11.74□□□□□ -0.53
CTCFL-218ENST00000608440 CREBZFQ9NS37 354 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 SCN1AP35498 2009 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 TMEM129A0AVI4 362 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 FFAR2O15552 330 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 FMO6PO60774 539 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 EPXP11678 715 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 CYBAP13498 195 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 SNRPBP14678 240 aaKnown RBP11.74□□□□□ -0.53
CTCFL-218ENST00000608440 XCR1P46094 333 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 RPL34P49207 117 aaKnown RBP11.74□□□□□ -0.53
CTCFL-218ENST00000608440 SLC10A7Q0GE19 358 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 ILF3Q12906 894 aaKnown RBP eCLIP11.74□□□□□ -0.53
CTCFL-218ENST00000608440 RGNQ15493 299 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 OCLNQ16625 522 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 PLEKHN1Q494U1 663 aaPredicted RBP11.74□□□□□ -0.53
CTCFL-218ENST00000608440 KRBOX4Q5JUW0 171 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 COX20Q5RI15 118 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 CLEC9AQ6UXN8 241 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 TRIM46Q7Z4K8 759 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 OR4F15Q8NGB8 312 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 NFKBIDQ8NI38 313 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 CD200R1Q8TD46 325 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 SELENOMQ8WWX9 145 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 TGM7Q96PF1 710 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 TM6SF2Q9BZW4 377 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 FAM117AQ9C073 453 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 RIMS4Q9H426 269 aaPredicted RBP11.74□□□□□ -0.53
CTCFL-218ENST00000608440 RNF122Q9H9V4 155 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 TLR8Q9NR97 1041 aaKnown RBP11.74□□□□□ -0.53
CTCFL-218ENST00000608440 GKN1Q9NS71 199 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 CBLCQ9ULV8 474 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 ANK1P16157 1881 aa11.74□□□□□ -0.53
CTCFL-218ENST00000608440 MOXD2PA6NHM9 499 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 F5H5P2 479 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 TGM5O43548 720 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 IGHV2-5P01817 119 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 RB1P06400 928 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 RHOP08100 348 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 C6P13671 934 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 CPN1P15169 458 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 DDTP30046 118 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 LIMS1P48059 325 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 PSEN2P49810 448 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 RNF144AP50876 292 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-218ENST00000608440 MMP15P51511 669 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 SEMG2Q02383 582 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 SP3Q02447 781 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 ALG11Q2TAA5 492 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 ZNF770Q6IQ21 691 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-218ENST00000608440 CPXM2Q8N436 756 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 FBXO15Q8NCQ5 510 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-218ENST00000608440 PAQR8Q8TEZ7 354 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 THEM6Q8WUY1 208 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 IMP4Q96G21 291 aaKnown RBP11.73□□□□□ -0.53
CTCFL-218ENST00000608440 RBM18Q96H35 190 aaKnown RBP11.73□□□□□ -0.53
CTCFL-218ENST00000608440 CDKN2AIPNLQ96HQ2 116 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 MED10Q9BTT4 135 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 TSPAN10Q9H1Z9 355 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-218ENST00000608440 PRDM13Q9H4Q3 707 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 CACYBPQ9HB71 228 aaKnown RBP11.73□□□□□ -0.53
CTCFL-218ENST00000608440 PRM3Q9NNZ6 103 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 NUDT4Q9NZJ9 180 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 FAM96BQ9Y3D0 163 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 PCDHB11Q9Y5F2 797 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 DSPPQ9NZW4 1301 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 A8MVJ9 347 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 TAPBPO15533 448 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 EIF4E2O60573 245 aaKnown RBP11.73□□□□□ -0.53
CTCFL-218ENST00000608440 SNAPC5O75971 98 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 FGF19O95750 216 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 LAMP1P11279 417 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 CPT2P23786 658 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 CCR7P32248 378 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 CD96P40200 585 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 ZNF140P52738 457 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-218ENST00000608440 ART1P52961 327 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 WNT3P56703 355 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 PPA1Q15181 289 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 LINC00303Q3SY05 128 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 AFMIDQ63HM1 303 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 ZNF626Q68DY1 528 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 ACSM5Q6NUN0 579 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 LINGO2Q7L985 606 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms