RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 PDCD4Q53EL6 469 aaKnown RBP13.06□□□□□ -0.32
HDDC2-204ENST00000608295 GPAT3Q53EU6 434 aa13.06□□□□□ -0.32
HDDC2-204ENST00000608295 COX20Q5RI15 118 aa13.06□□□□□ -0.32
HDDC2-204ENST00000608295 SAXO2Q658L1 398 aa13.06□□□□□ -0.32
HDDC2-204ENST00000608295 POMZP3Q6PJE2 187 aa13.06□□□□□ -0.32
HDDC2-204ENST00000608295 TMEM200AQ86VY9 491 aa13.06□□□□□ -0.32
HDDC2-204ENST00000608295 ZZZ3Q8IYH5 903 aa13.06□□□□□ -0.32
HDDC2-204ENST00000608295 FNDC9Q8TBE3 224 aa13.06□□□□□ -0.32
HDDC2-204ENST00000608295 ZPLD1Q8TCW7 415 aa13.06□□□□□ -0.32
HDDC2-204ENST00000608295 VPS33AQ96AX1 596 aa13.06□□□□□ -0.32
HDDC2-204ENST00000608295 MAELQ96JY0 434 aaKnown RBP13.06□□□□□ -0.32
HDDC2-204ENST00000608295 CCDC115Q96NT0 180 aa13.06□□□□□ -0.32
HDDC2-204ENST00000608295 SDF2Q99470 211 aa13.06□□□□□ -0.32
HDDC2-204ENST00000608295 ENKD1Q9H0I2 346 aa13.06□□□□□ -0.32
HDDC2-204ENST00000608295 CALHM2Q9HA72 323 aa13.06□□□□□ -0.32
HDDC2-204ENST00000608295 SLC6A13Q9NSD5 602 aa13.06□□□□□ -0.32
HDDC2-204ENST00000608295 EXD2Q9NVH0 621 aa13.06□□□□□ -0.32
HDDC2-204ENST00000608295 CLEC4AQ9UMR7 237 aa13.06□□□□□ -0.32
HDDC2-204ENST00000608295 IGLV3-32A0A0A0MS00 114 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 A0A1W2PQD3 144 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 HMGB1P1B2RPK0 211 aaPredicted RBP13.05□□□□□ -0.32
HDDC2-204ENST00000608295 H3BNH8 94 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 NR5A2O00482 541 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 TNFSF11O14788 317 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 SMNDC1O75940 238 aaKnown RBP eCLIP13.05□□□□□ -0.32
HDDC2-204ENST00000608295 ANP32DO95626 131 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 UBTFL6P0CB48 400 aaPredicted RBP13.05□□□□□ -0.32
HDDC2-204ENST00000608295 UBL4AP11441 157 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 CTSSP25774 331 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 SHC1P29353 583 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 CPA2P48052 419 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 STX1BP61266 288 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 SGCBQ16585 318 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 C6orf10Q5SRN2 563 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 ATAD3BQ5T9A4 648 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 LRRC34Q8IZ02 419 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 POC1BQ8TC44 478 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 ACTRT2Q8TDY3 377 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 ROPN1LQ96C74 230 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 DNAJA3Q96EY1 480 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 AURKBQ96GD4 344 aaPredicted RBP13.05□□□□□ -0.32
HDDC2-204ENST00000608295 C7orf26Q96N11 449 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 ZNF559Q9BR84 538 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 TCF7L2Q9NQB0 619 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 BTNL2Q9UIR0 455 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 KCNE5Q9UJ90 142 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 MRPS18CQ9Y3D5 142 aaKnown RBP13.05□□□□□ -0.32
HDDC2-204ENST00000608295 WDR45Q9Y484 360 aa13.05□□□□□ -0.32
HDDC2-204ENST00000608295 CLDN24A6NM45 220 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 RFXANKO14593 260 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 CXCL13O43927 109 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 BCAS1O75363 584 aaPredicted RBP13.04□□□□□ -0.32
HDDC2-204ENST00000608295 STX11O75558 287 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 IGFBP2P18065 325 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 AQP5P55064 265 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 KLHL26Q53HC5 615 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 VWA1Q6PCB0 445 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 EPGNQ6UW88 154 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 ADGRE4PQ86SQ3 457 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 GGNQ86UU5 652 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 MISPQ8IVT2 679 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 DMRTC2Q8IXT2 367 aaPredicted RBP13.04□□□□□ -0.32
HDDC2-204ENST00000608295 MIER2Q8N344 545 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 ANKFN1Q8N957 763 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 CHDHQ8NE62 594 aaPredicted RBP13.04□□□□□ -0.32
HDDC2-204ENST00000608295 FBXO27Q8NI29 283 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 WNT2BQ93097 391 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 ZNF524Q96C55 264 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 NEURL3Q96EH8 262 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 TM9SF2Q99805 663 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 SPOCK3Q9BQ16 436 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 PRRG4Q9BZD6 226 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 ZNF350Q9GZX5 532 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 L3MBTL1Q9Y468 752 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 DTNAQ9Y4J8 743 aa13.04□□□□□ -0.32
HDDC2-204ENST00000608295 UQCRHLA0A096LP55 91 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 A0A1W2PNV4 684 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 PRAMEF27A3QJZ7 478 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 DUXAA6NLW8 204 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 NPIPB9F8W1W9 429 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 HMGN4O00479 90 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 KIAA0513O60268 411 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 UGT2B17O75795 530 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 AQP8O94778 261 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 H6PDO95479 791 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 CSTAP01040 98 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 ZNF17P17021 662 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 LCN1P31025 176 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 RYKP34925 604 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 SLC6A8P48029 635 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 IDH3AP50213 366 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 P2RX1P51575 399 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 POLR2JP52435 117 aaKnown RBP13.03□□□□□ -0.32
HDDC2-204ENST00000608295 MAPK14Q16539 360 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 SYPL1Q16563 259 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 GSTA3Q16772 222 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 TMEM44Q2T9K0 475 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 ARHGAP11BQ3KRB8 267 aa13.03□□□□□ -0.32
HDDC2-204ENST00000608295 TYW3Q6IPR3 259 aaKnown RBP13.03□□□□□ -0.32
HDDC2-204ENST00000608295 SLC2A7Q6PXP3 512 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms