RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 OIP5O43482 229 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 LYPLA1O75608 230 aaPredicted RBP6.81□□□□□ -1.32
CUX1-219ENST00000606749 SOX30O94993 753 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 C6orf47O95873 294 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 NUDT17P0C025 328 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 NID1P14543 1247 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 CREB1P16220 341 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 PPP3CBP16298 524 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 ME2P23368 584 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 ADH6P28332 368 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 MAPK1P28482 360 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 SHC1P29353 583 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 ARRB2P32121 409 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 SERPINB5P36952 375 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 HPCAL1P37235 193 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 RPL3P39023 403 aaKnown RBP6.81□□□□□ -1.32
CUX1-219ENST00000606749 EIF1P41567 113 aaKnown RBP6.81□□□□□ -1.32
CUX1-219ENST00000606749 PTGR1Q14914 329 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 LSM12Q3MHD2 195 aaKnown RBP6.81□□□□□ -1.32
CUX1-219ENST00000606749 ATP6AP1LQ52LC2 224 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 PDSS1Q5T2R2 415 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 IL23RQ5VWK5 629 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 CBLN3Q6UW01 205 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 PRSS57Q6UWY2 283 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 ZCCHC23Q6ZST2 131 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 BEND4Q6ZU67 534 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 Q71RC1 249 aaPredicted RBP6.81□□□□□ -1.32
CUX1-219ENST00000606749 MTERF4Q7Z6M4 381 aaKnown RBP6.81□□□□□ -1.32
CUX1-219ENST00000606749 P3H2Q8IVL5 708 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 RIMKLAQ8IXN7 391 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 RIBC1Q8N443 379 aaPredicted RBP6.81□□□□□ -1.32
CUX1-219ENST00000606749 KRTCAP2Q8N6L1 136 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 NATD1Q8N6N6 113 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 PHOSPHO1Q8TCT1 267 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 AGR3Q8TD06 166 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 ADAMTS15Q8TE58 950 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 ROBO4Q8WZ75 1007 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 OR5P2Q8WZ92 322 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 CAVIN3Q969G5 261 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 ZNF524Q96C55 264 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 TRIM44Q96DX7 344 aaPredicted RBP6.81□□□□□ -1.32
CUX1-219ENST00000606749 CHMP6Q96FZ7 201 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 PRPF18Q99633 342 aaKnown RBP6.81□□□□□ -1.32
CUX1-219ENST00000606749 ACTRT3Q9BYD9 372 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 ROPN1BQ9BZX4 212 aaPredicted RBP6.81□□□□□ -1.32
CUX1-219ENST00000606749 HOXD1Q9GZZ0 328 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 TMEM185BQ9H7F4 350 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 CXorf36Q9H7Y0 433 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 ROPN1Q9HAT0 212 aaPredicted RBP6.81□□□□□ -1.32
CUX1-219ENST00000606749 ATAD3AQ9NVI7 634 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 GPATCH2Q9NW75 528 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 LGALS13Q9UHV8 139 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 ICAM5Q9UMF0 924 aa6.81□□□□□ -1.32
CUX1-219ENST00000606749 FAF1Q9UNN5 650 aaPredicted RBP6.81□□□□□ -1.32
CUX1-219ENST00000606749 NUP214P35658 2090 aaPredicted RBP6.8□□□□□ -1.32
CUX1-219ENST00000606749 UQCRHLA0A096LP55 91 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 NPIPA5A0A0B4J1W7 369 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 NPIPA7E9PJI5 369 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 NPIPB9F8W1W9 429 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 GTPBP1O00178 669 aaKnown RBP6.8□□□□□ -1.32
CUX1-219ENST00000606749 NUDT14O95848 222 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 TUBBP07437 444 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 BPGMP07738 259 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 NPIPA8P0DM63 369 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 PRPS1L1P21108 318 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 ATP6V1C1P21283 382 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 ADSLP30566 484 aaPredicted RBP6.8□□□□□ -1.32
CUX1-219ENST00000606749 SFTPDP35247 375 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 ETV4P43268 484 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 P2RX1P51575 399 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 ATP12AP54707 1039 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 VSNL1P62760 191 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 ZNF117Q03924 483 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 LTBQ06643 244 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 IFFO1Q0D2I5 559 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 TP53BP2Q13625 1128 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 TOMM34Q15785 309 aaPredicted RBP6.8□□□□□ -1.32
CUX1-219ENST00000606749 TMEM176BQ3YBM2 270 aaPredicted RBP6.8□□□□□ -1.32
CUX1-219ENST00000606749 SPDYE7PQ495Y7 208 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 BEX5Q5H9J7 111 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 Q5PR19 223 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 DCST2Q5T1A1 773 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.8□□□□□ -1.328e-7■■■■■ 33
CUX1-219ENST00000606749 CLEC9AQ6UXN8 241 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 C20orf204Q6ZNR8 217 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 STK32CQ86UX6 486 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 CIARTQ8N365 385 aaPredicted RBP6.8□□□□□ -1.32
CUX1-219ENST00000606749 FNDC5Q8NAU1 212 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 ZNF527Q8NB42 609 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 OR56A1Q8NGH5 318 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 FBXO27Q8NI29 283 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 PPP1R14CQ8TAE6 165 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 SFXN5Q8TD22 340 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 GPR119Q8TDV5 335 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 KLHL15Q96M94 604 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 SDF2Q99470 211 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 CCL19Q99731 98 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 C1orf50Q9BV19 199 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 HDHD5Q9BXW7 423 aa6.8□□□□□ -1.32
CUX1-219ENST00000606749 SRXN1Q9BYN0 137 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms