RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	MRPS6	P82932	125 aa	Known RBP	3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	NHLH1	Q02575	133 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	NHLH2	Q02577	135 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	MGAT3	Q09327	533 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	PMS2P3	Q13401	168 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	TKFC	Q3LXA3	575 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	PAGE3	Q5JUK9	113 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	ZNF546	Q86UE3	836 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	VWA5B2	Q8N398	1253 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	OR4N2	Q8NGD1	307 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	OR4A16	Q8NH70	328 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	FIBIN	Q8TAL6	211 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	ISG20	Q96AZ6	181 aa	Known RBP	3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	PRRC1	Q96M27	445 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	XYLT2	Q9H1B5	865 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	FAM155B	O75949	473 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	OR2C1	O95371	312 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	HOXB5	P09067	269 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	ZNF44	P15621	663 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SMPD1	P17405	629 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	RXRB	P28702	533 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	PRDX6	P30041	224 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SSTR4	P31391	388 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	VIPR1	P32241	457 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	GRM3	Q14832	879 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624		Q3ZCU0	254 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	ZNF789	Q5FWF6	425 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SYT6	Q5T7P8	510 aa	Predicted RBP	3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SDHAF4	Q5VUM1	108 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	UNC93A	Q86WB7	457 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	PLD5	Q8N7P1	536 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	CNEP1R1	Q8N9A8	125 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SPTSSA	Q969W0	71 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	PKP2	Q99959	881 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	RNF208	Q9H0X6	261 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	C1orf198	Q9H425	327 aa		3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	AFDN	P55196	1824 aa	Known RBP	3.87	□□□□□ -1.79
KCNMA1-223	ENST00000604624	MROH6	A6NGR9	719 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SIAH2	O43255	324 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	PCDH7	O60245	1069 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SLC16A7	O60669	478 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	KLK1	P06870	262 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	UBB	P0CG47	229 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	UBC	P0CG48	685 aa	Known RBP	3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	GCH1	P30793	250 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	HOXD12	P35452	270 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	MAP2K3	P46734	347 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	TGFBR3	Q03167	851 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	ZNF154	Q13106	437 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	MELK	Q14680	651 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	OR8B8	Q15620	311 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	GRIK5	Q16478	980 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	CTSL3P	Q5NE16	218 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	C12orf29	Q8N999	325 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	OR2T33	Q8NG76	320 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	TRMT2B	Q96GJ1	504 aa	Known RBP	3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	CASD1	Q96PB1	797 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	TECTB	Q96PL2	329 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	OR52B2	Q96RD2	323 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	GPR21	Q99679	349 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	NMNAT2	Q9BZQ4	307 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	CCM2L	Q9NUG4	571 aa	Predicted RBP	3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	TAS2R8	Q9NYW2	309 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SLC17A7	Q9P2U7	560 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	RIPK3	Q9Y572	518 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	TNRC6C	Q9HCJ0	1690 aa	Known RBP	3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	FAM170B	A6NMN3	283 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	FGF1	P05230	155 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	NDUFV2	P19404	249 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	CPT2	P23786	658 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	BMI1	P35226	326 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	MMP12	P39900	470 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	AGTR2	P50052	363 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	OGDH	Q02218	1023 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SEMG2	Q02383	582 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	GK3P	Q14409	553 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	TEAD2	Q15562	447 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	ZNF141	Q15928	474 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	PPM1J	Q5JR12	505 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	OR2T5	Q6IEZ7	315 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	DCLRE1A	Q6PJP8	1040 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	LINGO4	Q6UY18	593 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	HS3ST5	Q8IZT8	346 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	FRMD1	Q8N878	549 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	OR2T29	Q8NH02	315 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	FNDC8	Q8TC99	324 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	POM121	Q96HA1	1249 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	ZNF382	Q96SR6	550 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SLCO5A1	Q9H2Y9	848 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	C8orf33	Q9H7E9	229 aa	Predicted RBP	3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	CHST7	Q9NS84	486 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	FAM212B	Q9NTI7	297 aa	Predicted RBP	3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	TRAPPC13	A5PLN9	417 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	MAP2K7	O14733	419 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	CCL16	O15467	120 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	AGR2	O95994	175 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	TK1	P04183	234 aa		3.86	□□□□□ -1.79
KCNMA1-223	ENST00000604624	CHRM4	P08173	479 aa		3.86	□□□□□ -1.79

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