RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 MPDZO75970 2070 aa11.31□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 A0A087WUU8 490 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 IGHV1-45A0A0A0MS14 117 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CPSF4LA6NMK7 179 aaKnown RBP11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ZAR1LA6NP61 321 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 MITFO75030 526 aaPredicted RBP11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PPM1BO75688 479 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 GASTP01350 101 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 UMODP07911 640 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 UBL4AP11441 157 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ITIH1P19827 911 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 HTR2AP28223 471 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ETV5P41161 510 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ACAA2P42765 397 aaKnown RBP11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 GSSP48637 474 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CLK3P49761 638 aaKnown RBP11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 NR0B1P51843 470 aaKnown RBP11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CRISP1P54107 249 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 RPP38P78345 283 aaKnown RBP11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 COL9A2Q14055 689 aaPredicted RBP11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PCOLCEQ15113 449 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 OR1Q1Q15612 314 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 HES3Q5TGS1 186 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PLAG1Q6DJT9 500 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 RPL13AP3Q6NVV1 102 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TMEM81Q6P7N7 255 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TMEM154Q6P9G4 183 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ULK3Q6PHR2 472 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 KLHL17Q6TDP4 642 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 IGF2-ASQ6U949 168 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ZNF730Q6ZMV8 503 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 GALNT5Q7Z7M9 940 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 GALNT6Q8NCL4 622 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 OR4C3Q8NH37 302 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 SLC22A8Q8TCC7 542 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ELP5Q8TE02 316 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CNOT9Q92600 299 aaKnown RBP11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 OMA1Q96E52 524 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 SLC19A3Q9BZV2 496 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 LAT2Q9GZY6 243 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 POLR1BQ9H9Y6 1135 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 MMP25Q9NPA2 562 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 REV1Q9UBZ9 1251 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PISDQ9UG56 409 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PTRH2Q9Y3E5 179 aaKnown RBP11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PCDHGB6Q9Y5F9 930 aa11.3□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 A0A087WXM4 84 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 NPIPA5A0A0B4J1W7 369 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CLDN24A6NM45 220 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 C9orf172C9J069 976 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 NPIPA7E9PJI5 369 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ZNF264O43296 627 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 KLF4O43474 513 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 FRS3O43559 492 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 REM1O75628 298 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 OR6B1O95007 311 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 LYPD3O95274 346 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 SMIM18P0DKX4 95 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 NPIPA8P0DM63 369 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CYP4B1P13584 511 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ICAM2P13598 275 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 STAT5AP42229 794 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 OMPP47874 163 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 RFX3P48380 749 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 SUMO3P55854 103 aaPredicted RBP11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CTBP2P56545 445 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CDC42P60953 191 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TARDBPQ13148 414 aaKnown RBP eCLIP11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 SKP2Q13309 424 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 RAPSNQ13702 412 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 SSPNQ14714 243 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 NNATQ16517 81 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 C6orf141Q5SZD1 244 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ANKRD34AQ69YU3 496 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 LINC00114Q6XXX2 140 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 SHISA6Q6ZSJ9 500 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 RASSF6Q6ZTQ3 369 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 ZER1Q7Z7L7 766 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 HMGN2P46Q86SG4 172 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TMPRSS12Q86WS5 348 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TRUB1Q8WWH5 349 aaKnown RBP11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PMEPA1Q969W9 287 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 EFHD2Q96C19 240 aaPredicted RBP11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 IMMP1LQ96LU5 166 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PRSS27Q9BQR3 290 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PRRG3Q9BZD7 231 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 SLC25A19Q9HC21 320 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 SLC7A7Q9UM01 511 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 PCDHGA6Q9Y5G7 932 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 NPFFR2Q9Y5X5 522 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 HS3ST3B1Q9Y662 390 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CPAMD8Q8IZJ3 1885 aa11.29□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 KNTC1P50748 2209 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 TRBV11-1A0A0K0K1C0 115 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 CDK2AP1O14519 115 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 GDF9O60383 454 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 FADS1O60427 444 aa11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 NADKO95544 446 aaPredicted RBP11.28□□□□□ -0.6
NEDD8-MDP1-203ENST00000604306 THY1P04216 161 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms