RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 ROBO4Q8WZ75 1007 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 KLHL15Q96M94 604 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 STACQ99469 402 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 TRMOQ9BU70 441 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 SRXN1Q9BYN0 137 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 PIGUQ9H490 435 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 DUSP22Q9NRW4 184 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 ICAM5Q9UMF0 924 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 FIS1Q9Y3D6 152 aa16.04■□□□□ 0.16
CHMP2A-208ENST00000601220 CSPG4Q6UVK1 2322 aa16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 ANK3Q12955 4377 aaKnown RBP16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 TMEM233B4DJY2 109 aa16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 HS3ST1O14792 307 aa16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 TRIM13O60858 407 aa16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 TMCC2O75069 709 aa16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 HSPA4LO95757 839 aa16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 CHRNGP07510 517 aa16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 EIF1P41567 113 aaKnown RBP16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 POU6F2P78424 691 aaPredicted RBP16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 FOXF1Q12946 379 aa16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 ZNF239Q16600 458 aaKnown RBP16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 GALNTL6Q49A17 601 aa16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 NUFIP2Q7Z417 695 aaKnown RBP16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 SZRD1Q7Z422 152 aa16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 WFDC8Q8IUA0 241 aa16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 GABRG1Q8N1C3 465 aa16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 EIF1ADQ8N9N8 165 aaKnown RBP16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 OR7A2PQ8NGA2 310 aa16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 EPS8L3Q8TE67 593 aaKnown RBP16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 CDS1Q92903 461 aa16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 PPCSQ9HAB8 311 aa16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 GIMAP2Q9UG22 337 aa16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 TRAF6Q9Y4K3 522 aa16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 ACTL7BQ9Y614 415 aa16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 KCNE3Q9Y6H6 103 aa16.03■□□□□ 0.16
CHMP2A-208ENST00000601220 DSCAMO60469 2012 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 NPIPB9F8W1W9 429 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 KIF2AO00139 706 aaPredicted RBP16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 ZNF195O14628 629 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 SOX30O94993 753 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 NTN1O95631 604 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 TUBBP07437 444 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 LAMP1P11279 417 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 HPGDP15428 266 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 ME2P23368 584 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 ADH6P28332 368 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 PCSK6P29122 969 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 ASMTP46597 345 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 LASP1Q14847 261 aaKnown RBP16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 TOMM34Q15785 309 aaPredicted RBP16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 PDSS1Q5T2R2 415 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 GTF2IRD2BQ6EKJ0 949 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 ADAM5Q6NVV9 412 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 LRIG3Q6UXM1 1119 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 TFAP2EQ6VUC0 442 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 R3HCC1LQ7Z5L2 792 aaKnown RBP16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 MTERF4Q7Z6M4 381 aaKnown RBP16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 GTF2IRD2Q86UP8 949 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 FBXO27Q8NI29 283 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 RAB3IL1Q8TBN0 382 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 GPR119Q8TDV5 335 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 ABHD3Q8WU67 409 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 TMEM171Q8WVE6 324 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 TWIST2Q8WVJ9 160 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 S100PBPQ96BU1 408 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 MDFIQ99750 246 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 C12orf49Q9H741 205 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 ZCCHC3Q9NUD5 404 aaKnown RBP16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 GPATCH2Q9NW75 528 aa16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 ING1Q9UK53 422 aaPredicted RBP16.02■□□□□ 0.16
CHMP2A-208ENST00000601220 TLN2Q9Y4G6 2542 aa16.02■□□□□ 0.15
CHMP2A-208ENST00000601220 SMIM23A6NLE4 172 aa16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 INAFM1C9JVW0 142 aa16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 PIP5K1BO14986 540 aa16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 SCAMP2O15127 329 aaKnown RBP16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 ELK4P28324 431 aa16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 ALDH3A1P30838 453 aa16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 ARRB2P32121 409 aa16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 SFTPDP35247 375 aa16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 RNF144AP50876 292 aaPredicted RBP16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 KRTAP1-1Q07627 177 aa16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 TSC22D1Q15714 1073 aa16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 XKR7Q5GH72 579 aa16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 ARL13AQ5H913 290 aaPredicted RBP16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 CDC73Q6P1J9 531 aa16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 SEZ6L2Q6UXD5 910 aa16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 STK32CQ86UX6 486 aa16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 TUSC5Q8IXB3 177 aa16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 JADE3Q92613 823 aa16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 AKAP1Q92667 903 aaKnown RBP eCLIP16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 CXorf36Q9H7Y0 433 aa16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 COQ10BQ9H8M1 238 aa16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 FANCFQ9NPI8 374 aa16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 MKS1Q9NXB0 559 aa16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 KLHL13Q9P2N7 655 aa16.01■□□□□ 0.15
CHMP2A-208ENST00000601220 PRR14LQ5THK1 2151 aa16■□□□□ 0.15
CHMP2A-208ENST00000601220 NPIPA5A0A0B4J1W7 369 aa16■□□□□ 0.15
CHMP2A-208ENST00000601220 ESPNB1AK53 854 aa16■□□□□ 0.15
CHMP2A-208ENST00000601220 ZNF814B7Z6K7 855 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms