RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 LRRC34Q8IZ02 419 aa14.18□□□□□ -0.14
VRK3-221ENST00000600284 OR6K3Q8NGY3 331 aa14.18□□□□□ -0.14
VRK3-221ENST00000600284 OR2V1Q8NHB1 315 aa14.18□□□□□ -0.14
VRK3-221ENST00000600284 POC1BQ8TC44 478 aa14.18□□□□□ -0.14
VRK3-221ENST00000600284 OTUB1Q96FW1 271 aaPredicted RBP14.18□□□□□ -0.14
VRK3-221ENST00000600284 SH3YL1Q96HL8 342 aaPredicted RBP14.18□□□□□ -0.14
VRK3-221ENST00000600284 RNF145Q96MT1 663 aa14.18□□□□□ -0.14
VRK3-221ENST00000600284 WFIKKN1Q96NZ8 548 aa14.18□□□□□ -0.14
VRK3-221ENST00000600284 ABCA4P78363 2273 aa14.18□□□□□ -0.14
VRK3-221ENST00000600284 PRRC2AP48634 2157 aaKnown RBP14.17□□□□□ -0.14
VRK3-221ENST00000600284 NPIPB9F8W1W9 429 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 RNASET2O00584 256 aaKnown RBP14.17□□□□□ -0.14
VRK3-221ENST00000600284 CFLARO15519 480 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 ITM2AO43736 263 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 ZNF500O60304 480 aaPredicted RBP14.17□□□□□ -0.14
VRK3-221ENST00000600284 SS18L1O75177 396 aaPredicted RBP14.17□□□□□ -0.14
VRK3-221ENST00000600284 SYNGR4O95473 234 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 TUBBP07437 444 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 DHRS4L1P0CG22 281 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 ELK4P28324 431 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 KCNJ5P48544 419 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 RPL14P50914 215 aaKnown RBP14.17□□□□□ -0.14
VRK3-221ENST00000600284 PPP2R2AP63151 447 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 HBA1P69905 142 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 TNFAIP8L3Q5GJ75 292 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 CROCCP2Q86T23 111 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 ZNF781Q8N8C0 355 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 ZNF610Q8N9Z0 462 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 OR8J2Q8NGG1 315 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 PHOSPHO1Q8TCT1 267 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 PKNOX2Q96KN3 472 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 NPAS1Q99742 590 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 AKTIPQ9H8T0 292 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 FANCFQ9NPI8 374 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 HAO1Q9UJM8 370 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 RAB21Q9UL25 225 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 ICAM5Q9UMF0 924 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 DTNAQ9Y4J8 743 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 GPC6Q9Y625 555 aaPredicted RBP14.17□□□□□ -0.14
VRK3-221ENST00000600284 KCNE3Q9Y6H6 103 aa14.17□□□□□ -0.14
VRK3-221ENST00000600284 ITPR3Q14573 2671 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 A0A0J9YW62 118 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 WDR91A4D1P6 747 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 CXCL13O43927 109 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 AK1P00568 194 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 PLGP00747 810 aaPredicted RBP14.16□□□□□ -0.14
VRK3-221ENST00000600284 PABPC4LP0CB38 370 aaKnown RBP14.16□□□□□ -0.14
VRK3-221ENST00000600284 CRYGSP22914 178 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 SLC6A8P48029 635 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 SLC1A6P48664 564 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 CTBP2P56545 445 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 CARD18P57730 90 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 ZNF117Q03924 483 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 PGS1Q32NB8 556 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 HBMQ6B0K9 141 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 LILRA2Q8N149 483 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 NUDT8Q8WV74 236 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 OSTF1Q92882 214 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 KLHL15Q96M94 604 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 OR7D2Q96RA2 312 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 SDF2Q99470 211 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 MED18Q9BUE0 208 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 NMUR2Q9GZQ4 415 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 TIGARQ9NQ88 270 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 BEX4Q9NWD9 120 aaPredicted RBP14.16□□□□□ -0.14
VRK3-221ENST00000600284 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.16□□□□□ -0.14
VRK3-221ENST00000600284 PCDHGB4Q9UN71 923 aa14.16□□□□□ -0.14
VRK3-221ENST00000600284 V9GYY5 206 aaPredicted RBP14.16□□□□□ -0.14
VRK3-221ENST00000600284 HRNRQ86YZ3 2850 aaPredicted RBP14.16□□□□□ -0.14
VRK3-221ENST00000600284 GJE1A6NN92 205 aa14.15□□□□□ -0.14
VRK3-221ENST00000600284 GTPBP1O00178 669 aaKnown RBP14.15□□□□□ -0.14
VRK3-221ENST00000600284 TNFSF11O14788 317 aa14.15□□□□□ -0.14
VRK3-221ENST00000600284 EIF4E2O60573 245 aaKnown RBP14.15□□□□□ -0.14
VRK3-221ENST00000600284 PPP3CBP16298 524 aa14.15□□□□□ -0.14
VRK3-221ENST00000600284 KLK2P20151 261 aa14.15□□□□□ -0.14
VRK3-221ENST00000600284 MATN1P21941 496 aa14.15□□□□□ -0.14
VRK3-221ENST00000600284 POU4F3Q15319 338 aa14.15□□□□□ -0.14
VRK3-221ENST00000600284 PDCD2Q16342 344 aaPredicted RBP14.15□□□□□ -0.14
VRK3-221ENST00000600284 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.15□□□□□ -0.14
VRK3-221ENST00000600284 OR4F3Q6IEY1 312 aa14.15□□□□□ -0.14
VRK3-221ENST00000600284 PPP4R4Q6NUP7 873 aa14.15□□□□□ -0.14
VRK3-221ENST00000600284 CBLN3Q6UW01 205 aa14.15□□□□□ -0.14
VRK3-221ENST00000600284 C6orf120Q7Z4R8 191 aa14.15□□□□□ -0.14
VRK3-221ENST00000600284 VPS37AQ8NEZ2 397 aa14.15□□□□□ -0.14
VRK3-221ENST00000600284 OR5AK3PQ8NH89 298 aa14.15□□□□□ -0.14
VRK3-221ENST00000600284 GPR119Q8TDV5 335 aa14.15□□□□□ -0.14
VRK3-221ENST00000600284 TESCQ96BS2 214 aa14.15□□□□□ -0.14
VRK3-221ENST00000600284 ARSGQ96EG1 525 aa14.15□□□□□ -0.14
VRK3-221ENST00000600284 C20orf27Q9GZN8 174 aa14.15□□□□□ -0.14
VRK3-221ENST00000600284 ZNF395Q9H8N7 513 aaPredicted RBP14.15□□□□□ -0.14
VRK3-221ENST00000600284 KLHL28Q9NXS3 571 aa14.15□□□□□ -0.14
VRK3-221ENST00000600284 CARD8Q9Y2G2 431 aa14.15□□□□□ -0.14
VRK3-221ENST00000600284 UQCRHLA0A096LP55 91 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 PRSS51A0A1B0GVH4 220 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 A0A1W2PPR1 153 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 DEFB108AA8MXU0 73 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 ZNF195O14628 629 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 STX11O75558 287 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 NUDT14O95848 222 aa14.14□□□□□ -0.15
VRK3-221ENST00000600284 AGR2O95994 175 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms