RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 NPAP1Q9NZP6 1156 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 KLHL13Q9P2N7 655 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 STOML1Q9UBI4 398 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 ZNF180Q9UJW8 692 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 MRTO4Q9UKD2 239 aaKnown RBP5.41□□□□□ -1.54
VRK3-220ENST00000600259 CDC42EP3Q9UKI2 254 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 PYCARDQ9ULZ3 195 aa5.41□□□□□ -1.54
VRK3-220ENST00000600259 WBP11Q9Y2W2 641 aaKnown RBP5.41□□□□□ -1.54
VRK3-220ENST00000600259 UTP11Q9Y3A2 253 aaKnown RBP5.41□□□□□ -1.54
VRK3-220ENST00000600259 YLPM1P49750 1951 aaKnown RBP5.4□□□□□ -1.54
VRK3-220ENST00000600259 A0A1W2PQD3 144 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 FAM234BA2RU67 622 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 ESPNB1AK53 854 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 TRIM49D1C9J1S8 452 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 NPIPB9F8W1W9 429 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 ETV2O00321 342 aaPredicted RBP5.4□□□□□ -1.54
VRK3-220ENST00000600259 ZNF195O14628 629 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 RGS14O43566 566 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 TBX19O60806 448 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 PRKD3O94806 890 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 KCNH1O95259 989 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 ENO1P06733 434 aaKnown RBP5.4□□□□□ -1.54
VRK3-220ENST00000600259 INHBAP08476 426 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 PABPC4LP0CB38 370 aaKnown RBP5.4□□□□□ -1.54
VRK3-220ENST00000600259 PRPS2P11908 318 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 ENPP1P22413 925 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 IGHV1-2P23083 117 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 GCAP28676 217 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 LCN1P31025 176 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 NTF4P34130 210 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 SFTPDP35247 375 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 OR3A2P47893 321 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 RFX3P48380 749 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 PRIM2P49643 509 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 SERPINB9P50453 376 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 PKNOX1P55347 436 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 SRSF2Q01130 221 aaKnown RBP5.4□□□□□ -1.54
VRK3-220ENST00000600259 ZNF763Q0D2J5 394 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 RNPS1Q15287 305 aaKnown RBP5.4□□□□□ -1.54
VRK3-220ENST00000600259 ZNHIT3Q15649 155 aaPredicted RBP5.4□□□□□ -1.54
VRK3-220ENST00000600259 TOMM34Q15785 309 aaPredicted RBP5.4□□□□□ -1.54
VRK3-220ENST00000600259 DUSP5Q16690 384 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 KLHL26Q53HC5 615 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 ZNF385BQ569K4 471 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 SLC25A53Q5H9E4 307 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 PPP4R4Q6NUP7 873 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 NOXRED1Q6NXP6 359 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 CBLN3Q6UW01 205 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 Q6ZSR9 355 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 Q6ZT83 130 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 BHLHA15Q7RTS1 189 aaPredicted RBP5.4□□□□□ -1.54
VRK3-220ENST00000600259 TDRPQ86YL5 185 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 ARIH2OSQ8N7S6 290 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 CDRT4Q8N9R6 151 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 OR6Y1Q8NGX8 325 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 FAM76AQ8TAV0 307 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 GPR151Q8TDV0 419 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 KISS1RQ969F8 398 aaPredicted RBP5.4□□□□□ -1.54
VRK3-220ENST00000600259 CPNE4Q96A23 557 aaPredicted RBP5.4□□□□□ -1.54
VRK3-220ENST00000600259 L3HYPDHQ96EM0 354 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 C16orf58Q96GQ5 468 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 ZNF764Q96H86 408 aaPredicted RBP5.4□□□□□ -1.54
VRK3-220ENST00000600259 FCRL1Q96LA6 429 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 PAFAH2Q99487 392 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 PSD2Q9BQI7 771 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 RHNO1Q9BSD3 238 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 C19orf24Q9BVV8 132 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 CDC42EP4Q9H3Q1 356 aaKnown RBP5.4□□□□□ -1.54
VRK3-220ENST00000600259 C3orf14Q9HBI5 128 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 BARX1Q9HBU1 254 aaPredicted RBP5.4□□□□□ -1.54
VRK3-220ENST00000600259 NGBQ9NPG2 151 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 UBQLN4Q9NRR5 601 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 DDX18Q9NVP1 670 aaKnown RBP5.4□□□□□ -1.54
VRK3-220ENST00000600259 PRSS50Q9UI38 385 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 ICAM5Q9UMF0 924 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 NFU1Q9UMS0 254 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 SNX8Q9Y5X2 465 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 ACTL7BQ9Y614 415 aa5.4□□□□□ -1.54
VRK3-220ENST00000600259 IGHV3-15A0A0B4J1V0 119 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 SLC35F4A4IF30 521 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 VWC2LB2RUY7 222 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 C9JVG2 144 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 DNAJA2O60884 412 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 LYZL6O75951 148 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 SNRPAP09012 282 aaKnown RBP5.39□□□□□ -1.55
VRK3-220ENST00000600259 IGHV4-31P0DP07 118 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 COX5AP20674 150 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 PRPH2P23942 346 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 IL32P24001 234 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 ATP5F1P24539 256 aaPredicted RBP5.39□□□□□ -1.55
VRK3-220ENST00000600259 ELK4P28324 431 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 ECHS1P30084 290 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 HMOX2P30519 316 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 NTSP30990 170 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 TTKP33981 857 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 PHBP35232 272 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 EIF1P41567 113 aaKnown RBP5.39□□□□□ -1.55
VRK3-220ENST00000600259 DSCR9P59020 149 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 RAC3P60763 192 aa5.39□□□□□ -1.55
VRK3-220ENST00000600259 ZNF117Q03924 483 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms