RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 GPX2P18283 190 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 HK1P19367 917 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 TCEA1P23193 301 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 ACVR2AP27037 513 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 MSX1P28360 303 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 PGM1P36871 562 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 CRATP43155 626 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 STARP49675 285 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 DSTNP60981 165 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 SELPLGQ14242 412 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 GLYR1Q49A26 553 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 ATAD3BQ5T9A4 648 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 WLSQ5T9L3 541 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 ZNF585AQ6P3V2 769 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 ZNF527Q8NB42 609 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 B4GALNT2Q8NHY0 566 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 SH3YL1Q96HL8 342 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 TRIM8Q9BZR9 551 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 EXO5Q9H790 373 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 MED17Q9NVC6 651 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 DKKL1Q9UK85 242 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 ACAD8Q9UKU7 415 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 NDUFAF1Q9Y375 327 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 CHST2Q9Y4C5 530 aa17.64■□□□□ 0.41
SHKBP1-221ENST00000599833 AGAP5A6NIR3 686 aa17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 SNX3O60493 162 aa17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 WDR1O75083 606 aa17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 NTN1O95631 604 aa17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 ADSLP30566 484 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 CASP6P55212 293 aa17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 NUP107P57740 925 aa17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 FADDQ13158 208 aa17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 TOMM34Q15785 309 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 ADRM1Q16186 407 aa17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 ZNF630Q2M218 657 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 ACSF3Q4G176 576 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 GPAT3Q53EU6 434 aa17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 SPATA21Q7Z572 469 aa17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 DHDDSQ86SQ9 333 aa17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 PHOSPHO1Q8TCT1 267 aa17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 GPR119Q8TDV5 335 aa17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 MAL2Q969L2 176 aa17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 ARSGQ96EG1 525 aa17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 ELAC2Q9BQ52 826 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 TTYH2Q9BSA4 534 aa17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 MYLK2Q9H1R3 596 aa17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 A4GALTQ9NPC4 353 aa17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 ARMCX1Q9P291 453 aa17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 P2RX2Q9UBL9 471 aa17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 SUCOQ9UBS9 1254 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 ZNF337Q9Y3M9 751 aa17.63■□□□□ 0.41
SHKBP1-221ENST00000599833 MED12LQ86YW9 2145 aa17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 GMNCA6NCL1 334 aa17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 HCRTR2O43614 444 aa17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 EFNA2O43921 213 aa17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 EIF4E2O60573 245 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 TOXO94900 526 aa17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 GLI4P10075 376 aa17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 UBL4AP11441 157 aa17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 HPGDP15428 266 aa17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 ANXA11P50995 505 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 P2RX1P51575 399 aa17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 SUCLG1P53597 346 aaKnown RBP17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 RPS26P11Q5JNZ5 115 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 C1orf185Q5T7R7 199 aa17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 TREML1Q86YW5 311 aa17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 GTPBP8Q8N3Z3 284 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 TMEM19Q96HH6 336 aa17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 SFXN2Q96NB2 322 aa17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 ANKRD27Q96NW4 1050 aa17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 TREX2Q9BQ50 279 aaPredicted RBP17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 CCDC106Q9BWC9 280 aa17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 LAT2Q9GZY6 243 aa17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 PTGES2Q9H7Z7 377 aa17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 CENPEQ02224 2701 aa17.62■□□□□ 0.41
SHKBP1-221ENST00000599833 A0A087WZY1 265 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 FIGNL2A6NMB9 653 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 H0YC42 278 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 SLC22A2O15244 555 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 ZNF264O43296 627 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 BCHEP06276 602 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 ARAFP10398 606 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 NR2F1P10589 423 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 ZNF17P17021 662 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 IL11P20809 199 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 GZMMP51124 257 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 TPD52P55327 224 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 SUMO3P55854 103 aaPredicted RBP17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 DLX5P56178 289 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 GNGT1P63211 74 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 COQ5Q5HYK3 327 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 RPTNQ6XPR3 784 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 PTOV1Q86YD1 416 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 PMM1Q92871 262 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 UCN2Q96RP3 112 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 CGREF1Q99674 301 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 TUBA1CQ9BQE3 449 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 HHATLQ9HCP6 504 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 BCL2L10Q9HD36 194 aa17.61■□□□□ 0.41
SHKBP1-221ENST00000599833 VDAC3Q9Y277 283 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms