RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 ZNF141Q15928 474 aa25.46■■□□□ 1.67
SSBP4-206ENST00000599699 GTDC1Q4AE62 458 aa25.46■■□□□ 1.67
SSBP4-206ENST00000599699 TYW3Q6IPR3 259 aaKnown RBP25.46■■□□□ 1.67
SSBP4-206ENST00000599699 BLOC1S3Q6QNY0 202 aa25.46■■□□□ 1.67
SSBP4-206ENST00000599699 CBLN3Q6UW01 205 aa25.46■■□□□ 1.67
SSBP4-206ENST00000599699 FUNDC1Q8IVP5 155 aa25.46■■□□□ 1.67
SSBP4-206ENST00000599699 STON2Q8WXE9 905 aa25.46■■□□□ 1.67
SSBP4-206ENST00000599699 GTF2H4Q92759 462 aa25.46■■□□□ 1.67
SSBP4-206ENST00000599699 SPDL1Q96EA4 605 aa25.46■■□□□ 1.67
SSBP4-206ENST00000599699 RABEP2Q9H5N1 569 aa25.46■■□□□ 1.67
SSBP4-206ENST00000599699 TPT1P8Q9HAU6 139 aa25.46■■□□□ 1.67
SSBP4-206ENST00000599699 STOML1Q9UBI4 398 aa25.46■■□□□ 1.67
SSBP4-206ENST00000599699 LIPT1Q9Y234 373 aa25.46■■□□□ 1.67
SSBP4-206ENST00000599699 CENPEQ02224 2701 aa25.45■■□□□ 1.67
SSBP4-206ENST00000599699 ZNF264O43296 627 aa25.45■■□□□ 1.66
SSBP4-206ENST00000599699 UGT2B17O75795 530 aa25.45■■□□□ 1.66
SSBP4-206ENST00000599699 CYP7B1O75881 506 aa25.45■■□□□ 1.66
SSBP4-206ENST00000599699 H6PDO95479 791 aa25.45■■□□□ 1.66
SSBP4-206ENST00000599699 SNRPB2P08579 225 aaKnown RBP25.45■■□□□ 1.66
SSBP4-206ENST00000599699 VIMP08670 466 aaKnown RBP25.45■■□□□ 1.66
SSBP4-206ENST00000599699 NR2F1P10589 423 aa25.45■■□□□ 1.66
SSBP4-206ENST00000599699 COX6B1P14854 86 aa25.45■■□□□ 1.66
SSBP4-206ENST00000599699 ZNF17P17021 662 aa25.45■■□□□ 1.66
SSBP4-206ENST00000599699 CEACAM8P31997 349 aaPredicted RBP25.45■■□□□ 1.66
SSBP4-206ENST00000599699 CRATP43155 626 aa25.45■■□□□ 1.66
SSBP4-206ENST00000599699 CCR4P51679 360 aa25.45■■□□□ 1.66
SSBP4-206ENST00000599699 EEFSECP57772 596 aaKnown RBP25.45■■□□□ 1.66
SSBP4-206ENST00000599699 SYPL1Q16563 259 aa25.45■■□□□ 1.66
SSBP4-206ENST00000599699 PLPPR5Q32ZL2 321 aa25.45■■□□□ 1.66
SSBP4-206ENST00000599699 FRRS1Q6ZNA5 592 aa25.45■■□□□ 1.66
SSBP4-206ENST00000599699 LIX1LQ8IVB5 337 aa25.45■■□□□ 1.66
SSBP4-206ENST00000599699 ZNF619Q8N2I2 560 aa25.45■■□□□ 1.66
SSBP4-206ENST00000599699 GTPBP8Q8N3Z3 284 aaPredicted RBP25.45■■□□□ 1.66
SSBP4-206ENST00000599699 ANKFN1Q8N957 763 aa25.45■■□□□ 1.66
SSBP4-206ENST00000599699 AURKBQ96GD4 344 aaPredicted RBP25.45■■□□□ 1.66
SSBP4-206ENST00000599699 TRNT1Q96Q11 434 aaKnown RBP25.45■■□□□ 1.66
SSBP4-206ENST00000599699 KLHDC3Q9BQ90 382 aa25.45■■□□□ 1.66
SSBP4-206ENST00000599699 KCNE5Q9UJ90 142 aa25.45■■□□□ 1.66
SSBP4-206ENST00000599699 AP4B1Q9Y6B7 739 aa25.45■■□□□ 1.66
SSBP4-206ENST00000599699 UNC79Q9P2D8 2635 aa25.45■■□□□ 1.66
SSBP4-206ENST00000599699 CENPVL1A0A0U1RR11 272 aa25.44■■□□□ 1.66
SSBP4-206ENST00000599699 MBD3L4A6NDZ8 208 aaPredicted RBP25.44■■□□□ 1.66
SSBP4-206ENST00000599699 MBD3L3A6NE82 208 aaPredicted RBP25.44■■□□□ 1.66
SSBP4-206ENST00000599699 MBD3L5A6NJ08 208 aaPredicted RBP25.44■■□□□ 1.66
SSBP4-206ENST00000599699 HNRNPRO43390 633 aaKnown RBP25.44■■□□□ 1.66
SSBP4-206ENST00000599699 GUSBP08236 651 aa25.44■■□□□ 1.66
SSBP4-206ENST00000599699 TROVE2P10155 538 aaKnown RBP eCLIP25.44■■□□□ 1.66
SSBP4-206ENST00000599699 BMP5P22003 454 aa25.44■■□□□ 1.66
SSBP4-206ENST00000599699 SUMO3P55854 103 aaPredicted RBP25.44■■□□□ 1.66
SSBP4-206ENST00000599699 GUCY1A3Q02108 690 aa25.44■■□□□ 1.66
SSBP4-206ENST00000599699 TMEM44Q2T9K0 475 aa25.44■■□□□ 1.66
SSBP4-206ENST00000599699 PLXDC2Q6UX71 529 aa25.44■■□□□ 1.66
SSBP4-206ENST00000599699 EIF3MQ7L2H7 374 aaKnown RBP25.44■■□□□ 1.66
SSBP4-206ENST00000599699 GRAMD2AQ8IUY3 354 aa25.44■■□□□ 1.66
SSBP4-206ENST00000599699 C9orf106Q8NAJ2 232 aa25.44■■□□□ 1.66
SSBP4-206ENST00000599699 NAXEQ8NCW5 288 aa25.44■■□□□ 1.66
SSBP4-206ENST00000599699 MBD3L2Q8NHZ7 208 aaPredicted RBP25.44■■□□□ 1.66
SSBP4-206ENST00000599699 MARVELD3Q96A59 401 aa25.44■■□□□ 1.66
SSBP4-206ENST00000599699 RNF145Q96MT1 663 aa25.44■■□□□ 1.66
SSBP4-206ENST00000599699 FGFR1OP2Q9NVK5 253 aa25.44■■□□□ 1.66
SSBP4-206ENST00000599699 ICAM5Q9UMF0 924 aa25.44■■□□□ 1.66
SSBP4-206ENST00000599699 PCNX3Q9H6A9 2034 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 PRAMEF27A3QJZ7 478 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 H0YC42 278 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 DVL2O14641 736 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 ATP8B1O43520 1251 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 EIF4E2O60573 245 aaKnown RBP25.43■■□□□ 1.66
SSBP4-206ENST00000599699 CSTAP01040 98 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 ETFAP13804 333 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 MAGEA8P43361 318 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 TPD52P55327 224 aaPredicted RBP25.43■■□□□ 1.66
SSBP4-206ENST00000599699 CLDN20P56880 219 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 CHRNEQ04844 493 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 MAPK14Q16539 360 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 SLC25A35Q3KQZ1 300 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 P4HA3Q7Z4N8 544 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 HMGN2P46Q86SG4 172 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 TOR1AIP2Q8NFQ8 470 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 WNT2BQ93097 391 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 NPAS1Q99742 590 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 TM9SF2Q99805 663 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 PAIP1Q9H074 479 aaKnown RBP25.43■■□□□ 1.66
SSBP4-206ENST00000599699 SAP130Q9H0E3 1048 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 RUBCNLQ9H714 662 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 TMEM45AQ9NWC5 275 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 PCDHB14Q9Y5E9 798 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 CACNA1CQ13936 2221 aa25.43■■□□□ 1.66
SSBP4-206ENST00000599699 A0A096LPI6 279 aa25.42■■□□□ 1.66
SSBP4-206ENST00000599699 C7orf72A4D263 438 aa25.42■■□□□ 1.66
SSBP4-206ENST00000599699 SUCLG1P53597 346 aaKnown RBP25.42■■□□□ 1.66
SSBP4-206ENST00000599699 ADGRE4PQ86SQ3 457 aa25.42■■□□□ 1.66
SSBP4-206ENST00000599699 OR5W2Q8NH69 310 aa25.42■■□□□ 1.66
SSBP4-206ENST00000599699 CLCF1Q9UBD9 225 aa25.42■■□□□ 1.66
SSBP4-206ENST00000599699 P2RX2Q9UBL9 471 aa25.42■■□□□ 1.66
SSBP4-206ENST00000599699 L3MBTL1Q9Y468 752 aa25.42■■□□□ 1.66
SSBP4-206ENST00000599699 CHRM4P08173 479 aa25.41■■□□□ 1.66
SSBP4-206ENST00000599699 LINGO3P0C6S8 592 aa25.41■■□□□ 1.66
SSBP4-206ENST00000599699 UBTFL6P0CB48 400 aaPredicted RBP25.41■■□□□ 1.66
SSBP4-206ENST00000599699 TMIGD3P0DMS9 266 aaPredicted RBP25.41■■□□□ 1.66
SSBP4-206ENST00000599699 CAPN3P20807 821 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms