RNA–Protein interactions for RNA: ENST00000596644.5

IRF3-211, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-211ENST00000596644 HMGN2P46Q86SG4 172 aa13.57□□□□□ -0.24
IRF3-211ENST00000596644 DHDDSQ86SQ9 333 aa13.57□□□□□ -0.24
IRF3-211ENST00000596644 MSRB3Q8IXL7 192 aa13.57□□□□□ -0.24
IRF3-211ENST00000596644 OR10Q1Q8NGQ4 319 aa13.57□□□□□ -0.24
IRF3-211ENST00000596644 TSPEARQ8WU66 669 aa13.57□□□□□ -0.24
IRF3-211ENST00000596644 C10orf82Q8WW14 230 aa13.57□□□□□ -0.24
IRF3-211ENST00000596644 ZBTB8AQ96BR9 441 aa13.57□□□□□ -0.24
IRF3-211ENST00000596644 TTYH2Q9BSA4 534 aa13.57□□□□□ -0.24
IRF3-211ENST00000596644 FAM107BQ9H098 131 aa13.57□□□□□ -0.24
IRF3-211ENST00000596644 NSRP1Q9H0G5 558 aaKnown RBP13.57□□□□□ -0.24
IRF3-211ENST00000596644 SAR1AQ9NR31 198 aa13.57□□□□□ -0.24
IRF3-211ENST00000596644 MED17Q9NVC6 651 aa13.57□□□□□ -0.24
IRF3-211ENST00000596644 CALML5Q9NZT1 146 aa13.57□□□□□ -0.24
IRF3-211ENST00000596644 VAPAQ9P0L0 249 aa13.57□□□□□ -0.24
IRF3-211ENST00000596644 KCNE5Q9UJ90 142 aa13.57□□□□□ -0.24
IRF3-211ENST00000596644 CORO2BQ9UQ03 480 aa13.57□□□□□ -0.24
IRF3-211ENST00000596644 L3MBTL1Q9Y468 752 aa13.57□□□□□ -0.24
IRF3-211ENST00000596644 NCOA6Q14686 2063 aaPredicted RBP13.57□□□□□ -0.24
IRF3-211ENST00000596644 MED12Q93074 2177 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 ARHGAP21Q5T5U3 1957 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 EVPLLA8MZ36 301 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 SHISA8B8ZZ34 492 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 H3BML4 177 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 EIF4E2O60573 245 aaKnown RBP13.56□□□□□ -0.24
IRF3-211ENST00000596644 GLI4P10075 376 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 PEPDP12955 493 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 CPN1P15169 458 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 ZNF708P17019 499 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 ZNF17P17021 662 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 AGAP20933 346 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 LHX2P50458 406 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 CRISP3P54108 245 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 GYS2P54840 703 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 NFYCQ13952 458 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 GNA13Q14344 377 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 FGFBP1Q14512 234 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 MAPRE2Q15555 327 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 MAPK14Q16539 360 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 PLPPR5Q32ZL2 321 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 CBLN3Q6UW01 205 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 UBQLNLQ8IYU4 475 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 TOR1AIP2Q8NFQ8 470 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 SMPDL3BQ92485 455 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 SDCCAG3Q96C92 435 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 TRIB1Q96RU8 372 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 QRSL1Q9H0R6 528 aaKnown RBP13.56□□□□□ -0.24
IRF3-211ENST00000596644 SLC38A1Q9H2H9 487 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 RUBCNLQ9H714 662 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 CACYBPQ9HB71 228 aaKnown RBP13.56□□□□□ -0.24
IRF3-211ENST00000596644 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.56□□□□□ -0.24
IRF3-211ENST00000596644 ICAM5Q9UMF0 924 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 SLC35A3Q9Y2D2 325 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 ZNF337Q9Y3M9 751 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 DOPEY1Q5JWR5 2465 aa13.56□□□□□ -0.24
IRF3-211ENST00000596644 C5orf58C9J3I9 102 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 SEC14L5O43304 696 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 CLDN1O95832 211 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 TFPTP0C1Z6 253 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 UBTFL6P0CB48 400 aaPredicted RBP13.55□□□□□ -0.24
IRF3-211ENST00000596644 LSP1P33241 339 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 ADH7P40394 386 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 SEC24CP53992 1094 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 CLDN18P56856 261 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 GNGT1P63211 74 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 KLF10Q13118 480 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 SKP2Q13309 424 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 CBFBQ13951 182 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 BCL2A1Q16548 175 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 MMEL1Q495T6 779 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 GCNT6Q5T4J0 391 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 AP1ARQ63HQ0 302 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 CHMP1BQ7LBR1 199 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 MAMDC2Q7Z304 686 aaPredicted RBP13.55□□□□□ -0.24
IRF3-211ENST00000596644 SPATA21Q7Z572 469 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 RETREG3Q86VR2 466 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 LACC1Q8IV20 430 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 PEX5LQ8IYB4 626 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 GTPBP8Q8N3Z3 284 aaPredicted RBP13.55□□□□□ -0.24
IRF3-211ENST00000596644 DPP10Q8N608 796 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 MEIOBQ8N635 442 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 ZPLD1Q8TCW7 415 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 CA5BP1Q8WTZ4 195 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 SLC38A5Q8WUX1 472 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 WDR60Q8WVS4 1066 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 ASB5Q8WWX0 329 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 PMM1Q92871 262 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 ZG16BQ96DA0 208 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 TMEM19Q96HH6 336 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 ELAC2Q9BQ52 826 aaKnown RBP13.55□□□□□ -0.24
IRF3-211ENST00000596644 TUBA1CQ9BQE3 449 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 LAT2Q9GZY6 243 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 MTHFD2LQ9H903 347 aaPredicted RBP13.55□□□□□ -0.24
IRF3-211ENST00000596644 STOML1Q9UBI4 398 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 PLEKHB1Q9UF11 243 aaPredicted RBP13.55□□□□□ -0.24
IRF3-211ENST00000596644 RNF6Q9Y252 685 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 CAPN7Q9Y6W3 813 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 PCNX1Q96RV3 2341 aa13.55□□□□□ -0.24
IRF3-211ENST00000596644 TRBV5-3A0A0A0MS03 114 aa13.54□□□□□ -0.24
IRF3-211ENST00000596644 C7orf72A4D263 438 aa13.54□□□□□ -0.24
IRF3-211ENST00000596644 AGAP5A6NIR3 686 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms