RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 I3L1I5 382 aaPredicted RBP21.03■□□□□ 0.96
SRRM1-222ENST00000596378 ADAM11O75078 769 aa21.03■□□□□ 0.96
SRRM1-222ENST00000596378 MAZP56270 477 aaKnown RBP21.03■□□□□ 0.96
SRRM1-222ENST00000596378 PDZK1Q5T2W1 519 aa21.03■□□□□ 0.96
SRRM1-222ENST00000596378 FCRLBQ6BAA4 426 aa21.03■□□□□ 0.96
SRRM1-222ENST00000596378 THSD4Q6ZMP0 1018 aa21.03■□□□□ 0.96
SRRM1-222ENST00000596378 VWA5B2Q8N398 1253 aa21.03■□□□□ 0.96
SRRM1-222ENST00000596378 SPRYD4Q8WW59 207 aaPredicted RBP21.03■□□□□ 0.96
SRRM1-222ENST00000596378 MIXL1Q9H2W2 232 aa21.03■□□□□ 0.96
SRRM1-222ENST00000596378 TBC1D17Q9HA65 648 aa21.03■□□□□ 0.96
SRRM1-222ENST00000596378 KRCC1Q9NPI7 259 aaPredicted RBP21.03■□□□□ 0.96
SRRM1-222ENST00000596378 MED17Q9NVC6 651 aa21.03■□□□□ 0.96
SRRM1-222ENST00000596378 H2AFY2Q9P0M6 372 aaPredicted RBP21.03■□□□□ 0.96
SRRM1-222ENST00000596378 TGFBR3LH3BV60 316 aa21.02■□□□□ 0.96
SRRM1-222ENST00000596378 TBXA2RP21731 343 aa21.02■□□□□ 0.96
SRRM1-222ENST00000596378 GABRA5P31644 462 aa21.02■□□□□ 0.96
SRRM1-222ENST00000596378 BAK1Q16611 211 aa21.02■□□□□ 0.96
SRRM1-222ENST00000596378 ARMC6Q6NXE6 501 aa21.02■□□□□ 0.96
SRRM1-222ENST00000596378 PTCHD1Q96NR3 888 aa21.02■□□□□ 0.96
SRRM1-222ENST00000596378 NECTIN4Q96NY8 510 aa21.02■□□□□ 0.96
SRRM1-222ENST00000596378 CD180Q99467 661 aa21.02■□□□□ 0.96
SRRM1-222ENST00000596378 CCDC32Q9BV29 185 aa21.02■□□□□ 0.96
SRRM1-222ENST00000596378 KATNB1Q9BVA0 655 aa21.02■□□□□ 0.96
SRRM1-222ENST00000596378 POMT2Q9UKY4 750 aa21.02■□□□□ 0.96
SRRM1-222ENST00000596378 EXOGQ9Y2C4 368 aaKnown RBP21.02■□□□□ 0.96
SRRM1-222ENST00000596378 RFPL3O75679 317 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 HMGN1P05114 100 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 CELP19835 753 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 EMDP50402 254 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 TPTEP56180 551 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 DSG2Q14126 1118 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 ERV3-1Q14264 604 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 MANEAQ5SRI9 462 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 CAMKK1Q8N5S9 505 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 CLDN22Q8N7P3 220 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 BRIX1Q8TDN6 353 aaKnown RBP21.01■□□□□ 0.95
SRRM1-222ENST00000596378 HS6ST2Q96MM7 605 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 TBX5Q99593 518 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 HDHD5Q9BXW7 423 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 ISG20L2Q9H9L3 353 aaKnown RBP21.01■□□□□ 0.95
SRRM1-222ENST00000596378 SIAEQ9HAT2 523 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 TIGARQ9NQ88 270 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 TRAV27A0A087WT01 109 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 A0A1W2PQL4 384 aaPredicted RBP21.01■□□□□ 0.95
SRRM1-222ENST00000596378 SLC9B1P1A6NJY1 282 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 OR5K4A6NMS3 321 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 BHLHE40O14503 412 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 SNPHO15079 494 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 DEFA1P59665 94 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 DEFA3P59666 94 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 MAT1AQ00266 395 aaKnown RBP21.01■□□□□ 0.95
SRRM1-222ENST00000596378 FZD5Q13467 585 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 EGFL6Q8IUX8 553 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 BPIFA2Q96DR5 249 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 ITPKCQ96DU7 683 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 SEMA6CQ9H3T2 930 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 ISYNA1Q9NPH2 558 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 MEPEQ9NQ76 525 aaPredicted RBP21.01■□□□□ 0.95
SRRM1-222ENST00000596378 TNFRSF10DQ9UBN6 386 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 DTX4Q9Y2E6 619 aa21.01■□□□□ 0.95
SRRM1-222ENST00000596378 LINC00854A0A1B0GVQ3 168 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 IGKV1D-16P01601 117 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 IGHA1P01876 353 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 SAGP10523 405 aaPredicted RBP21■□□□□ 0.95
SRRM1-222ENST00000596378 SSTR4P31391 388 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 SLC9A3P48764 834 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 PSG6Q00889 435 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 CSTF1Q05048 431 aaKnown RBP21■□□□□ 0.95
SRRM1-222ENST00000596378 ZCCHC12Q6PEW1 402 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 KLBQ86Z14 1044 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 KLHL36Q8N4N3 616 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 ARHGEF39Q8N4T4 335 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 DEFB119Q8N690 84 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 C19orf47Q8N9M1 422 aaKnown RBP21■□□□□ 0.95
SRRM1-222ENST00000596378 OR52L1Q8NGH7 329 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 ART5Q96L15 291 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 LRRC61Q9BV99 259 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 FLRT3Q9NZU0 649 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 TRAPPC4Q9Y296 219 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 A0A0C4DFX4 3053 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 NKX2-2O95096 273 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 SLC35E2P0CK97 266 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 S1PR1P21453 382 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 OR51A7Q8NH64 312 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 PEX11GQ96HA9 241 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 WDFY2Q96P53 400 aa21■□□□□ 0.95
SRRM1-222ENST00000596378 DVL2O14641 736 aa20.99■□□□□ 0.95
SRRM1-222ENST00000596378 CCR5P51681 352 aa20.99■□□□□ 0.95
SRRM1-222ENST00000596378 SELENBP1Q13228 472 aa20.99■□□□□ 0.95
SRRM1-222ENST00000596378 NNATQ16517 81 aa20.99■□□□□ 0.95
SRRM1-222ENST00000596378 VASNQ6EMK4 673 aa20.99■□□□□ 0.95
SRRM1-222ENST00000596378 NIPAL3Q6P499 406 aa20.99■□□□□ 0.95
SRRM1-222ENST00000596378 MCATQ8IVS2 390 aaKnown RBP20.99■□□□□ 0.95
SRRM1-222ENST00000596378 TPSD1Q9BZJ3 242 aa20.99■□□□□ 0.95
SRRM1-222ENST00000596378 SRRQ9GZT4 340 aa20.99■□□□□ 0.95
SRRM1-222ENST00000596378 HYAL3O43820 417 aaPredicted RBP20.99■□□□□ 0.95
SRRM1-222ENST00000596378 NCR1O76036 304 aa20.99■□□□□ 0.95
SRRM1-222ENST00000596378 BMP7P18075 431 aa20.99■□□□□ 0.95
SRRM1-222ENST00000596378 TMEM44Q2T9K0 475 aa20.99■□□□□ 0.95
SRRM1-222ENST00000596378 AMZ1Q400G9 498 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms