RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 RSL1D1O76021 490 aaKnown RBP8.84□□□□□ -0.99
LIG1-209ENST00000596104 F12P00748 615 aaPredicted RBP8.84□□□□□ -0.99
LIG1-209ENST00000596104 ADAP00813 363 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 FAM157CP0CG43 387 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 ELK4P28324 431 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 GCAP28676 217 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 ECHS1P30084 290 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 LCN1P31025 176 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 CASQ1P31415 396 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 FRKP42685 505 aaPredicted RBP8.84□□□□□ -0.99
LIG1-209ENST00000596104 ETF1P62495 437 aaKnown RBP8.84□□□□□ -0.99
LIG1-209ENST00000596104 ITGADQ13349 1161 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 KIAA0040Q15053 153 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 DUSP5Q16690 384 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 IMPG1Q17R60 797 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 VPS26BQ4G0F5 336 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 ZNF385BQ569K4 471 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 C6orf52Q5T4I8 152 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 ANKRD26P1Q6NSI1 321 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.84□□□□□ -0.99
LIG1-209ENST00000596104 LCA5Q86VQ0 697 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 TDRPQ86YL5 185 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 MMGT1Q8N4V1 131 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 BANPQ8N9N5 519 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 OR10H5Q8NGA6 315 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 OR6Y1Q8NGX8 325 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 CEP70Q8NHQ1 597 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 B4GALNT2Q8NHY0 566 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 FBXO30Q8TB52 745 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 CPNE4Q96A23 557 aaPredicted RBP8.84□□□□□ -0.99
LIG1-209ENST00000596104 CIDECQ96AQ7 238 aaPredicted RBP8.84□□□□□ -0.99
LIG1-209ENST00000596104 HS6ST2Q96MM7 605 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 TSPYL1Q9H0U9 437 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 COQ10BQ9H8M1 238 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 TNFRSF12AQ9NP84 129 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 UBQLN4Q9NRR5 601 aa8.84□□□□□ -0.99
LIG1-209ENST00000596104 ING1Q9UK53 422 aaPredicted RBP8.84□□□□□ -0.99
LIG1-209ENST00000596104 PCNX3Q9H6A9 2034 aa8.83□□□□□ -1
LIG1-209ENST00000596104 A0A087WUV0 522 aaPredicted RBP8.83□□□□□ -1
LIG1-209ENST00000596104 PDPK1O15530 556 aa8.83□□□□□ -1
LIG1-209ENST00000596104 OIP5O43482 229 aa8.83□□□□□ -1
LIG1-209ENST00000596104 TBX19O60806 448 aa8.83□□□□□ -1
LIG1-209ENST00000596104 PRKD3O94806 890 aa8.83□□□□□ -1
LIG1-209ENST00000596104 YES1P07947 543 aa8.83□□□□□ -1
LIG1-209ENST00000596104 EDNRAP25101 427 aa8.83□□□□□ -1
LIG1-209ENST00000596104 GPC1P35052 558 aa8.83□□□□□ -1
LIG1-209ENST00000596104 EIF1P41567 113 aaKnown RBP8.83□□□□□ -1
LIG1-209ENST00000596104 OR3A2P47893 321 aa8.83□□□□□ -1
LIG1-209ENST00000596104 PRKAG1P54619 331 aa8.83□□□□□ -1
LIG1-209ENST00000596104 C21orf58P58505 322 aa8.83□□□□□ -1
LIG1-209ENST00000596104 ZNF117Q03924 483 aa8.83□□□□□ -1
LIG1-209ENST00000596104 TMEM249Q2WGJ8 235 aa8.83□□□□□ -1
LIG1-209ENST00000596104 CCNJQ5T5M9 372 aa8.83□□□□□ -1
LIG1-209ENST00000596104 CBLN3Q6UW01 205 aa8.83□□□□□ -1
LIG1-209ENST00000596104 SYT10Q6XYQ8 523 aa8.83□□□□□ -1
LIG1-209ENST00000596104 Q6ZT83 130 aa8.83□□□□□ -1
LIG1-209ENST00000596104 FCRLAQ7L513 359 aa8.83□□□□□ -1
LIG1-209ENST00000596104 BHLHA15Q7RTS1 189 aaPredicted RBP8.83□□□□□ -1
LIG1-209ENST00000596104 NUP43Q8NFH3 380 aa8.83□□□□□ -1
LIG1-209ENST00000596104 OTUB1Q96FW1 271 aaPredicted RBP8.83□□□□□ -1
LIG1-209ENST00000596104 C16orf58Q96GQ5 468 aa8.83□□□□□ -1
LIG1-209ENST00000596104 REXO5Q96IC2 774 aaKnown RBP8.83□□□□□ -1
LIG1-209ENST00000596104 METTL2AQ96IZ6 378 aaKnown RBP8.83□□□□□ -1
LIG1-209ENST00000596104 FCRL1Q96LA6 429 aa8.83□□□□□ -1
LIG1-209ENST00000596104 MS4A4EQ96PG1 132 aa8.83□□□□□ -1
LIG1-209ENST00000596104 FMO2Q99518 471 aa8.83□□□□□ -1
LIG1-209ENST00000596104 CXorf36Q9H7Y0 433 aa8.83□□□□□ -1
LIG1-209ENST00000596104 BCO1Q9HAY6 547 aa8.83□□□□□ -1
LIG1-209ENST00000596104 TIGARQ9NQ88 270 aa8.83□□□□□ -1
LIG1-209ENST00000596104 CISD1Q9NZ45 108 aaKnown RBP8.83□□□□□ -1
LIG1-209ENST00000596104 NPAP1Q9NZP6 1156 aa8.83□□□□□ -1
LIG1-209ENST00000596104 CDC42EP3Q9UKI2 254 aa8.83□□□□□ -1
LIG1-209ENST00000596104 EMCNQ9ULC0 261 aa8.83□□□□□ -1
LIG1-209ENST00000596104 B3GALT5Q9Y2C3 310 aa8.83□□□□□ -1
LIG1-209ENST00000596104 CR1P17927 2039 aa8.83□□□□□ -1
LIG1-209ENST00000596104 CUBNO60494 3623 aa8.82□□□□□ -1
LIG1-209ENST00000596104 CADP27708 2225 aa8.82□□□□□ -1
LIG1-209ENST00000596104 GOLGA8QA0A0J9YX86 632 aa8.82□□□□□ -1
LIG1-209ENST00000596104 EXOC1LA0A1B0GW35 172 aa8.82□□□□□ -1
LIG1-209ENST00000596104 GOLGA8OA6NCC3 632 aa8.82□□□□□ -1
LIG1-209ENST00000596104 GOLGA8NF8WBI6 632 aa8.82□□□□□ -1
LIG1-209ENST00000596104 G3V2L1 256 aa8.82□□□□□ -1
LIG1-209ENST00000596104 H3BQF6 201 aa8.82□□□□□ -1
LIG1-209ENST00000596104 GOLGA8RI6L899 631 aa8.82□□□□□ -1
LIG1-209ENST00000596104 KIF2AO00139 706 aaPredicted RBP8.82□□□□□ -1
LIG1-209ENST00000596104 SCDO00767 359 aa8.82□□□□□ -1
LIG1-209ENST00000596104 ZNF195O14628 629 aa8.82□□□□□ -1
LIG1-209ENST00000596104 SSX4O60224 188 aa8.82□□□□□ -1
LIG1-209ENST00000596104 LYZL6O75951 148 aa8.82□□□□□ -1
LIG1-209ENST00000596104 FESP07332 822 aa8.82□□□□□ -1
LIG1-209ENST00000596104 HPGDP15428 266 aa8.82□□□□□ -1
LIG1-209ENST00000596104 COX5AP20674 150 aa8.82□□□□□ -1
LIG1-209ENST00000596104 PTNP21246 168 aa8.82□□□□□ -1
LIG1-209ENST00000596104 ENPP1P22413 925 aa8.82□□□□□ -1
LIG1-209ENST00000596104 PRPH2P23942 346 aa8.82□□□□□ -1
LIG1-209ENST00000596104 CDH11P55287 796 aa8.82□□□□□ -1
LIG1-209ENST00000596104 IRX1P78414 480 aaPredicted RBP8.82□□□□□ -1
LIG1-209ENST00000596104 VLDLRP98155 873 aa8.82□□□□□ -1
LIG1-209ENST00000596104 CKAP4Q07065 602 aaKnown RBP8.82□□□□□ -1
LIG1-209ENST00000596104 LOXL1Q08397 574 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms