RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 TBL1XR1Q9BZK7 514 aa16.14■□□□□ 0.17
HOMER3-208ENST00000595756 HHATLQ9HCP6 504 aa16.14■□□□□ 0.17
HOMER3-208ENST00000595756 KLHL14Q9P2G3 628 aa16.14■□□□□ 0.17
HOMER3-208ENST00000595756 ZNF175Q9Y473 711 aa16.14■□□□□ 0.17
HOMER3-208ENST00000595756 ACANP16112 2415 aa16.14■□□□□ 0.17
HOMER3-208ENST00000595756 OR2M5A3KFT3 312 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 TNFRSF21O75509 655 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 NKX2-2O95096 273 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 UTS2O95399 124 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 C6orf47O95873 294 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 PGRP06401 933 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 KLK2P20151 261 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 RFX3P48380 749 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 NME5P56597 212 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 CLDN15P56746 228 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 C17orf67Q0P5P2 114 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 FGFBP1Q14512 234 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 METTL25Q8N6Q8 603 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 CDRT4Q8N9R6 151 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 NUP43Q8NFH3 380 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 OR56A1Q8NGH5 318 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 SFXN5Q8TD22 340 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 STARD4Q96DR4 205 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 MS4A4EQ96PG1 132 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 OR52E6Q96RD3 313 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 TMEM120AQ9BXJ8 343 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 NSRP1Q9H0G5 558 aaKnown RBP16.13■□□□□ 0.17
HOMER3-208ENST00000595756 RMND5AQ9H871 391 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 RNF122Q9H9V4 155 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 EQTNQ9NQ60 294 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 NDRG3Q9UGV2 375 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 BTNL2Q9UIR0 455 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 ZNF337Q9Y3M9 751 aa16.13■□□□□ 0.17
HOMER3-208ENST00000595756 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 GXYLT2A0PJZ3 443 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 FAM234BA2RU67 622 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 H3BML4 177 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 SEC14L5O43304 696 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 ANGPTL1O95841 491 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 NGFRP08138 427 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 KRT16P08779 473 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 ZNF17P17021 662 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 NCF2P19878 526 aaPredicted RBP16.12■□□□□ 0.17
HOMER3-208ENST00000595756 GABRA3P34903 492 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 PRIM2P49643 509 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 POLR2JP52435 117 aaKnown RBP16.12■□□□□ 0.17
HOMER3-208ENST00000595756 KEAP1Q14145 624 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 SQLEQ14534 574 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 TMEM44Q2T9K0 475 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 DEFB113Q30KQ7 82 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 GRAMD1BQ3KR37 738 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 SPDYE7PQ495Y7 208 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 VWA1Q6PCB0 445 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 MARCH3Q86UD3 253 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 TRIML2Q8N7C3 387 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 CNEP1R1Q8N9A8 125 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 GPR151Q8TDV0 419 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 DUSP19Q8WTR2 217 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 FIG4Q92562 907 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 PIK3R3Q92569 461 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 GIMAP5Q96F15 307 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 MARK4Q96L34 752 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 TEX37Q96LM6 180 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 PINK1Q9BXM7 581 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 ZCCHC3Q9NUD5 404 aaKnown RBP16.12■□□□□ 0.17
HOMER3-208ENST00000595756 SNX8Q9Y5X2 465 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 AP4B1Q9Y6B7 739 aa16.12■□□□□ 0.17
HOMER3-208ENST00000595756 ALG1L2C9J202 215 aa16.11■□□□□ 0.17
HOMER3-208ENST00000595756 H0YC42 278 aa16.11■□□□□ 0.17
HOMER3-208ENST00000595756 SCN2BO60939 215 aa16.11■□□□□ 0.17
HOMER3-208ENST00000595756 IGKV1D-16P01601 117 aa16.11■□□□□ 0.17
HOMER3-208ENST00000595756 FCGR2AP12318 317 aa16.11■□□□□ 0.17
HOMER3-208ENST00000595756 IL12AP29459 219 aa16.11■□□□□ 0.17
HOMER3-208ENST00000595756 KIR2DL2P43627 348 aaPredicted RBP16.11■□□□□ 0.17
HOMER3-208ENST00000595756 CCT3P49368 545 aaKnown RBP16.11■□□□□ 0.17
HOMER3-208ENST00000595756 SUCLG1P53597 346 aaKnown RBP16.11■□□□□ 0.17
HOMER3-208ENST00000595756 PRKAG1P54619 331 aa16.11■□□□□ 0.17
HOMER3-208ENST00000595756 TPD52P55327 224 aaPredicted RBP16.11■□□□□ 0.17
HOMER3-208ENST00000595756 RPS3AP61247 264 aaKnown RBP16.11■□□□□ 0.17
HOMER3-208ENST00000595756 HBA1P69905 142 aa16.11■□□□□ 0.17
HOMER3-208ENST00000595756 FOXD4Q12950 439 aaPredicted RBP16.11■□□□□ 0.17
HOMER3-208ENST00000595756 GUSBP1Q15486 140 aa16.11■□□□□ 0.17
HOMER3-208ENST00000595756 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.11■□□□□ 0.17
HOMER3-208ENST00000595756 APOOLQ6UXV4 268 aa16.11■□□□□ 0.17
HOMER3-208ENST00000595756 SZRD1Q7Z422 152 aa16.11■□□□□ 0.17
HOMER3-208ENST00000595756 OR4A15Q8NGL6 344 aa16.11■□□□□ 0.17
HOMER3-208ENST00000595756 FAM120BQ96EK7 910 aaKnown RBP16.11■□□□□ 0.17
HOMER3-208ENST00000595756 CCDC115Q96NT0 180 aa16.11■□□□□ 0.17
HOMER3-208ENST00000595756 DLL4Q9NR61 685 aa16.11■□□□□ 0.17
HOMER3-208ENST00000595756 SIRT3Q9NTG7 399 aaPredicted RBP16.11■□□□□ 0.17
HOMER3-208ENST00000595756 A0A1W2PPR1 153 aa16.1■□□□□ 0.17
HOMER3-208ENST00000595756 SMNDC1O75940 238 aaKnown RBP eCLIP16.1■□□□□ 0.17
HOMER3-208ENST00000595756 OXSR1O95747 527 aaPredicted RBP16.1■□□□□ 0.17
HOMER3-208ENST00000595756 CD8BP10966 210 aa16.1■□□□□ 0.17
HOMER3-208ENST00000595756 ACP2P11117 423 aa16.1■□□□□ 0.17
HOMER3-208ENST00000595756 EFNA1P20827 205 aaPredicted RBP16.1■□□□□ 0.17
HOMER3-208ENST00000595756 UQCRC2P22695 453 aa16.1■□□□□ 0.17
HOMER3-208ENST00000595756 LCN1P31025 176 aa16.1■□□□□ 0.17
HOMER3-208ENST00000595756 CCKARP32238 428 aa16.1■□□□□ 0.17
HOMER3-208ENST00000595756 LSP1P33241 339 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms