RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 SLC9B1P1A6NJY1 282 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 C1QTNF3-AMACRE9PGA6 284 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 PRICKLE3O43900 615 aaPredicted RBP12.32□□□□□ -0.44
VRK3-209ENST00000594948 ITGA10O75578 1167 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 RCBTB2O95199 551 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 NTN1O95631 604 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 SAGP10523 405 aaPredicted RBP12.32□□□□□ -0.44
VRK3-209ENST00000594948 BMP7P18075 431 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 ZNF136P52737 540 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 NRG3P56975 720 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 ACTC1P68032 377 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 ACTA1P68133 377 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 HSF2Q03933 536 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 DUSP8Q13202 625 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 DYRK1AQ13627 763 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 ZNF750Q32MQ0 723 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 SMUG1Q53HV7 270 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 WDR45BQ5MNZ6 344 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 C18orf63Q68DL7 685 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 MFSD12Q6NUT3 480 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 SLC39A5Q6ZMH5 540 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 ZNF836Q6ZNA1 936 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 CEACAM19Q7Z692 300 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 SAMD14Q8IZD0 417 aaPredicted RBP12.32□□□□□ -0.44
VRK3-209ENST00000594948 SLC43A2Q8N370 569 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 TOMM5Q8N4H5 51 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 MFSD9Q8NBP5 474 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 OR9A2Q8NGT5 310 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 HSD17B8Q92506 261 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 YIPF5Q969M3 257 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 INSM2Q96T92 566 aaPredicted RBP12.32□□□□□ -0.44
VRK3-209ENST00000594948 CD180Q99467 661 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 PPIL3Q9H2H8 161 aaKnown RBP12.32□□□□□ -0.44
VRK3-209ENST00000594948 SLC6A20Q9NP91 592 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 NUDT15Q9NV35 164 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 UCKL1Q9NWZ5 548 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 SIDT1Q9NXL6 827 aaKnown RBP12.32□□□□□ -0.44
VRK3-209ENST00000594948 HAO2Q9NYQ3 351 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 ZNF222Q9UK12 451 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 TBX21Q9UL17 535 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 BAIAP2Q9UQB8 552 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 NTNG1Q9Y2I2 539 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 NPTNQ9Y639 398 aa12.32□□□□□ -0.44
VRK3-209ENST00000594948 ANTXRLA6NF34 631 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 TUBAL3A6NHL2 446 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 FAM183AA6NL82 134 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 FMO6PO60774 539 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 SERPINA3P01011 423 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 CD1AP06126 327 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 POU3F3P20264 500 aaPredicted RBP12.31□□□□□ -0.44
VRK3-209ENST00000594948 RAB3BP20337 219 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 STXBP1P61764 594 aaKnown RBP12.31□□□□□ -0.44
VRK3-209ENST00000594948 EEF1A1P68104 462 aaKnown RBP12.31□□□□□ -0.44
VRK3-209ENST00000594948 AGERQ15109 404 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 MLF2Q15773 248 aaPredicted RBP12.31□□□□□ -0.44
VRK3-209ENST00000594948 KLHL12Q53G59 568 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 CLLU1Q5K131 121 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 GARNL3Q5VVW2 1013 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 PLPP4Q5VZY2 271 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 SLC22A10Q63ZE4 541 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 DMKNQ6E0U4 476 aaPredicted RBP12.31□□□□□ -0.44
VRK3-209ENST00000594948 ARL9Q6T311 187 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 B3GLCTQ6Y288 498 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 TMPRSS11FQ6ZWK6 438 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 ASPGQ86U10 573 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 C12orf40Q86WS4 652 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 NXPE3Q969Y0 559 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 C12orf66Q96MD2 445 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 TIMM29Q9BSF4 260 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 TEX101Q9BY14 249 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 PRDM9Q9NQV7 894 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 TM7SF3Q9NS93 570 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 CAMK2AQ9UQM7 478 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 WDR45Q9Y484 360 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 SNRNP200O75643 2136 aaKnown RBP12.31□□□□□ -0.44
VRK3-209ENST00000594948 CEP350Q5VT06 3117 aa12.31□□□□□ -0.44
VRK3-209ENST00000594948 TRAV6A0A075B6T7 132 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 PRRT4C9JH25 899 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 LRRN3E7EW58 273 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 PRR23D1E9PI22 279 aaPredicted RBP12.3□□□□□ -0.44
VRK3-209ENST00000594948 BTN3A3O00478 584 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 ZNF749O43361 778 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 FCMRO60667 390 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 KCNJ13O60928 360 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 TMEM127O75204 238 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 SNAPC5O75971 98 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 IFNA7P01567 189 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 PDGFAP04085 211 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 PCCBP05166 539 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 PRR23D2P0DMB1 279 aaPredicted RBP12.3□□□□□ -0.44
VRK3-209ENST00000594948 C8orf89P0DMQ9 161 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 TBXA2RP21731 343 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 RPS4Y1P22090 263 aaKnown RBP12.3□□□□□ -0.44
VRK3-209ENST00000594948 SLC2A5P22732 501 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 CERS1P27544 350 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 PTGER1P34995 402 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 P2RY2P41231 377 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 FXYD6P3P58550 94 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 POU4F2Q12837 409 aa12.3□□□□□ -0.44
VRK3-209ENST00000594948 GAS6Q14393 721 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms