RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 NXNQ6DKJ4 435 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 HDXQ7Z353 690 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 ANKRD46Q86W74 232 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 OR5D16Q8NGK9 328 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 ARL8AQ96BM9 186 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 SH3YL1Q96HL8 342 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 C7orf26Q96N11 449 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 OR52E6Q96RD3 313 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 PANX1Q96RD7 426 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 PINK1Q9BXM7 581 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 WDR55Q9H6Y2 383 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 VIPAS39Q9H9C1 493 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 GPR45Q9Y5Y3 372 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 DCHS2Q6V1P9 2916 aa15.99■□□□□ 0.15
SHKBP1-204ENST00000594862 GOLGA8QA0A0J9YX86 632 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 GOLGA8OA6NCC3 632 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 HMGB1P1B2RPK0 211 aaPredicted RBP15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 GOLGA8NF8WBI6 632 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 GMFGO60234 142 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 EIF4E2O60573 245 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 NUDT14O95848 222 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 IL6P05231 212 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 UBL4AP11441 157 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 RPS26P62854 115 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 ZNF117Q03924 483 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 SGCBQ16585 318 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 HEPHL1Q6MZM0 1159 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 MSANTD1Q6ZTZ1 278 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 ESPNLQ6ZVH7 1005 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 TMEM200AQ86VY9 491 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 ZNF614Q8N883 585 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 LRRC8CQ8TDW0 803 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 SMPDL3BQ92485 455 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 ZNF75CPQ92670 426 aaPredicted RBP15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 SLC35A5Q9BS91 424 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 ZNF350Q9GZX5 532 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 OR51I1Q9H343 314 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 ZIM2Q9NZV7 527 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 MCTS1Q9ULC4 181 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 GPC6Q9Y625 555 aaPredicted RBP15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 KCNE3Q9Y6H6 103 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 KIAA1549Q9HCM3 1950 aa15.98■□□□□ 0.15
SHKBP1-204ENST00000594862 CELSR1Q9NYQ6 3014 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 TACC2O95359 2948 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 A0A1W2PNV4 684 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 TUBAL3A6NHL2 446 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 MSTNO14793 375 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 ZNF264O43296 627 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 TGM6O95932 706 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 SUCLG1P53597 346 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 CLDN15P56746 228 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 CLDN20P56880 219 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 UFM1P61960 85 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 FOXF2Q12947 444 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 PON3Q15166 354 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 ZNF141Q15928 474 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 GGNQ86UU5 652 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 GCNT2Q8N0V5 402 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 OR5M1Q8NGP8 315 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 DYDC1Q8WWB3 177 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 RNF145Q96MT1 663 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 RBM24Q9BX46 236 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 SERHL2Q9H4I8 314 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 RMND5AQ9H871 391 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 RNF122Q9H9V4 155 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 SDR39U1Q9NRG7 319 aaPredicted RBP15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 ICAM5Q9UMF0 924 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 LIPT1Q9Y234 373 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 MED12Q93074 2177 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 F8P00451 2351 aa15.97■□□□□ 0.15
SHKBP1-204ENST00000594862 C2CD3Q4AC94 2353 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 SERINC4A6NH21 518 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 EIF1AYO14602 144 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 ADAMDEC1O15204 470 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 UBDO15205 165 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 KIAA0513O60268 411 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 SLC22A3O75751 556 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 TGDSO95455 350 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 SYNGR4O95473 234 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 LINGO3P0C6S8 592 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 PSMA4P25789 261 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 NME5P56597 212 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 PHC1P78364 1004 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 CBFBQ13951 182 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 GPR68Q15743 365 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 AP1ARQ63HQ0 302 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 EIF3MQ7L2H7 374 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 CDH24Q86UP0 819 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 TMCO5AQ8N6Q1 288 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 ARSGQ96EG1 525 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 MRGPRX4Q96LA9 322 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 PRRG4Q9BZD6 226 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 TIGARQ9NQ88 270 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 GLRX2Q9NS18 164 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 EDARQ9UNE0 448 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 SLC35A3Q9Y2D2 325 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 CARD8Q9Y2G2 431 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 WDR45Q9Y484 360 aa15.96■□□□□ 0.15
SHKBP1-204ENST00000594862 USH1CQ9Y6N9 552 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms