RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 A0A1W2PPC4 97 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 DPM1O60762 260 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 LALBAP00709 142 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 TNFRSF1BP20333 461 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 SSR2P43308 183 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 CDK6Q00534 326 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 CYP27C1Q4G0S4 372 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 NHLRC3Q5JS37 347 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 METAP1DQ6UB28 335 aaPredicted RBP14.35□□□□□ -0.11
PNKP-204ENST00000594661 CHMP1BQ7LBR1 199 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 Q8N402 240 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 B3GNT7Q8NFL0 401 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 OR11H7Q8NGC8 314 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 OR2T4Q8NH00 348 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 EPYCQ99645 322 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 SARGQ9BW04 601 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 PRR14Q9BWN1 585 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 C1QTNF6Q9BXI9 259 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 NLNQ9BYT8 704 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 CXorf36Q9H7Y0 433 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 ADAM29Q9UKF5 820 aa14.35□□□□□ -0.11
PNKP-204ENST00000594661 MDC1Q14676 2089 aaKnown RBP14.34□□□□□ -0.11
PNKP-204ENST00000594661 LOC102723532A0A0G2JNH3 316 aa14.34□□□□□ -0.11
PNKP-204ENST00000594661 MPTX1A8MV57 137 aa14.34□□□□□ -0.11
PNKP-204ENST00000594661 AGRPO00253 132 aa14.34□□□□□ -0.11
PNKP-204ENST00000594661 FCER2P06734 321 aa14.34□□□□□ -0.11
PNKP-204ENST00000594661 ADRA2AP08913 450 aa14.34□□□□□ -0.11
PNKP-204ENST00000594661 H2AFB1P0C5Y9 115 aa14.34□□□□□ -0.11
PNKP-204ENST00000594661 H2AFB2P0C5Z0 115 aa14.34□□□□□ -0.11
PNKP-204ENST00000594661 UQCRC2P22695 453 aa14.34□□□□□ -0.11
PNKP-204ENST00000594661 POU1F1P28069 291 aa14.34□□□□□ -0.11
PNKP-204ENST00000594661 AHRP35869 848 aa14.34□□□□□ -0.11
PNKP-204ENST00000594661 HEPACAMQ14CZ8 416 aa14.34□□□□□ -0.11
PNKP-204ENST00000594661 RGS7BPQ6MZT1 257 aaPredicted RBP14.34□□□□□ -0.11
PNKP-204ENST00000594661 Q6ZPB1 254 aaPredicted RBP14.34□□□□□ -0.11
PNKP-204ENST00000594661 LUZP2Q86TE4 346 aa14.34□□□□□ -0.11
PNKP-204ENST00000594661 PAQR7Q86WK9 346 aa14.34□□□□□ -0.11
PNKP-204ENST00000594661 DEFB119Q8N690 84 aa14.34□□□□□ -0.11
PNKP-204ENST00000594661 NXPE2Q96DL1 559 aa14.34□□□□□ -0.11
PNKP-204ENST00000594661 MS4A6EQ96DS6 147 aa14.34□□□□□ -0.11
PNKP-204ENST00000594661 FCRL4Q96PJ5 515 aa14.34□□□□□ -0.11
PNKP-204ENST00000594661 PCDHGA9Q9Y5G4 932 aaKnown RBP14.34□□□□□ -0.11
PNKP-204ENST00000594661 TRAV6A0A075B6T7 132 aa14.33□□□□□ -0.11
PNKP-204ENST00000594661 ERI3O43414 337 aaKnown RBP14.33□□□□□ -0.11
PNKP-204ENST00000594661 SIGLEC6O43699 453 aa14.33□□□□□ -0.11
PNKP-204ENST00000594661 SSX5O60225 188 aa14.33□□□□□ -0.11
PNKP-204ENST00000594661 STOMP27105 288 aa14.33□□□□□ -0.11
PNKP-204ENST00000594661 APEX1P27695 318 aaKnown RBP14.33□□□□□ -0.11
PNKP-204ENST00000594661 OR1E2P47887 323 aa14.33□□□□□ -0.11
PNKP-204ENST00000594661 AGFG1P52594 562 aaKnown RBP14.33□□□□□ -0.11
PNKP-204ENST00000594661 MANFP55145 182 aaKnown RBP14.33□□□□□ -0.11
PNKP-204ENST00000594661 EEF1A2Q05639 463 aaKnown RBP14.33□□□□□ -0.11
PNKP-204ENST00000594661 ZNF630Q2M218 657 aaPredicted RBP14.33□□□□□ -0.11
PNKP-204ENST00000594661 TMEM35AQ53FP2 167 aa14.33□□□□□ -0.11
PNKP-204ENST00000594661 IFI44LQ53G44 452 aa14.33□□□□□ -0.11
PNKP-204ENST00000594661 PABPC1L2AQ5JQF8 200 aa14.33□□□□□ -0.11
PNKP-204ENST00000594661 TMPRSS9Q7Z410 1059 aa14.33□□□□□ -0.11
PNKP-204ENST00000594661 ASPGQ86U10 573 aa14.33□□□□□ -0.11
PNKP-204ENST00000594661 MFSD9Q8NBP5 474 aa14.33□□□□□ -0.11
PNKP-204ENST00000594661 OR10G6Q8NH81 332 aa14.33□□□□□ -0.11
PNKP-204ENST00000594661 KCNC2Q96PR1 638 aa14.33□□□□□ -0.11
PNKP-204ENST00000594661 GSDMCQ9BYG8 508 aa14.33□□□□□ -0.11
PNKP-204ENST00000594661 ESRP2Q9H6T0 727 aaKnown RBP14.33□□□□□ -0.11
PNKP-204ENST00000594661 ANKRA2Q9H9E1 313 aa14.33□□□□□ -0.11
PNKP-204ENST00000594661 NDUFAF4Q9P032 175 aa14.33□□□□□ -0.11
PNKP-204ENST00000594661 DTX4Q9Y2E6 619 aa14.33□□□□□ -0.11
PNKP-204ENST00000594661 GOLGA4Q13439 2230 aaKnown RBP14.33□□□□□ -0.12
PNKP-204ENST00000594661 WWP2O00308 870 aa14.33□□□□□ -0.12
PNKP-204ENST00000594661 TBX19O60806 448 aa14.33□□□□□ -0.12
PNKP-204ENST00000594661 ZNF217O75362 1048 aa14.33□□□□□ -0.12
PNKP-204ENST00000594661 FOSL2P15408 326 aa14.33□□□□□ -0.12
PNKP-204ENST00000594661 PSMA1P25786 263 aaKnown RBP14.33□□□□□ -0.12
PNKP-204ENST00000594661 C1orf61Q13536 156 aa14.33□□□□□ -0.12
PNKP-204ENST00000594661 CD276Q5ZPR3 534 aa14.33□□□□□ -0.12
PNKP-204ENST00000594661 FAM92BQ6ZTR7 304 aa14.33□□□□□ -0.12
PNKP-204ENST00000594661 TSEN54Q7Z6J9 526 aaKnown RBP14.33□□□□□ -0.12
PNKP-204ENST00000594661 OR6C4Q8NGE1 309 aa14.33□□□□□ -0.12
PNKP-204ENST00000594661 EXOSC8Q96B26 276 aaKnown RBP14.33□□□□□ -0.12
PNKP-204ENST00000594661 SCMH1Q96GD3 660 aa14.33□□□□□ -0.12
PNKP-204ENST00000594661 TWSG1Q9GZX9 223 aa14.33□□□□□ -0.12
PNKP-204ENST00000594661 B3GAT2Q9NPZ5 323 aa14.33□□□□□ -0.12
PNKP-204ENST00000594661 APOBEC3BQ9UH17 382 aaKnown RBP14.33□□□□□ -0.12
PNKP-204ENST00000594661 ANGPT4Q9Y264 503 aa14.33□□□□□ -0.12
PNKP-204ENST00000594661 LSM2Q9Y333 95 aaKnown RBP14.33□□□□□ -0.12
PNKP-204ENST00000594661 SNX11Q9Y5W9 270 aa14.33□□□□□ -0.12
PNKP-204ENST00000594661 TRAV20A0A0B4J274 112 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 OR6C74A6NCV1 312 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 AKAP8O43823 692 aaKnown RBP14.32□□□□□ -0.12
PNKP-204ENST00000594661 PRKRAO75569 313 aaKnown RBP14.32□□□□□ -0.12
PNKP-204ENST00000594661 CDRT1O95170 752 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 APOL3O95236 402 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 FGF2P09038 288 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 ARAFP10398 606 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 UGT2B7P16662 529 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 UBE2IP63279 158 aaKnown RBP14.32□□□□□ -0.12
PNKP-204ENST00000594661 CAMK2DQ13557 499 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 KIR2DS3Q14952 304 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 PDSS1Q5T2R2 415 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 ABHD17CQ6PCB6 329 aa14.32□□□□□ -0.12
PNKP-204ENST00000594661 VN1R4Q7Z5H5 301 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms