RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 RBMS1P29558 406 aaKnown RBP13.95□□□□□ -0.18
VRK3-207ENST00000594092 IFNA8P32881 189 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 PNLIPRP2P54317 469 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 TAS2R41P59536 307 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 IL18R1Q13478 541 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 DGCR6Q14129 220 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 ZSWIM7Q19AV6 140 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 ISLR2Q6UXK2 745 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 APOOLQ6UXV4 268 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 RANBP3LQ86VV4 465 aaPredicted RBP13.95□□□□□ -0.18
VRK3-207ENST00000594092 OR9Q2Q8NGE9 314 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 M1APQ8TC57 530 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 FUZQ9BT04 418 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 DEFB126Q9BYW3 111 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 FAM117AQ9C073 453 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 EVA1AQ9H8M9 152 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 ZNF160Q9HCG1 818 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 MMP25Q9NPA2 562 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 PAPOLBQ9NRJ5 636 aaKnown RBP13.95□□□□□ -0.18
VRK3-207ENST00000594092 MAN2C1Q9NTJ4 1040 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 MYOTQ9UBF9 498 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 POFUT2Q9Y2G5 429 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 NPFFR2Q9Y5X5 522 aa13.95□□□□□ -0.18
VRK3-207ENST00000594092 BCKDKO14874 412 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 GFRA3O60609 400 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 HPGDP15428 266 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 RPS6KA3P51812 740 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 SEC23BQ15437 767 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 FNDC7Q5VTL7 733 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 PLEKHM3Q6ZWE6 761 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 THAP5Q7Z6K1 395 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 ZNF786Q8N393 782 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 SLC7A13Q8TCU3 470 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 ADAMTS16Q8TE57 1224 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 NKD1Q969G9 470 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 ING2Q9H160 280 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 ASCL3Q9NQ33 180 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 CDV3Q9UKY7 258 aaKnown RBP13.94□□□□□ -0.18
VRK3-207ENST00000594092 OR6C70A6NIJ9 312 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.94□□□□□ -0.18
VRK3-207ENST00000594092 H3BNH8 94 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 SCDO00767 359 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 FMO6PO60774 539 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 ADAM11O75078 769 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 PPM1BO75688 479 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 CSTAP01040 98 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 NGFRP08138 427 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 HTR2AP28223 471 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 POLR2IP36954 125 aaKnown RBP13.94□□□□□ -0.18
VRK3-207ENST00000594092 ADH7P40394 386 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 IL10RAQ13651 578 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 KEAP1Q14145 624 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 CD226Q15762 336 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 NDUFAF6Q330K2 333 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 ZNF691Q5VV52 312 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 AQP11Q8NBQ7 271 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 SLC35B4Q969S0 331 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 NACC2Q96BF6 587 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 ARSGQ96EG1 525 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 GABARAPL3Q9BY60 117 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 GRIP2Q9C0E4 1043 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 ZBTB20Q9HC78 741 aaPredicted RBP13.94□□□□□ -0.18
VRK3-207ENST00000594092 TESQ9UGI8 421 aaKnown RBP13.94□□□□□ -0.18
VRK3-207ENST00000594092 ENOPH1Q9UHY7 261 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 SLC35A3Q9Y2D2 325 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 PCDHGA6Q9Y5G7 932 aa13.94□□□□□ -0.18
VRK3-207ENST00000594092 MRPS18BQ9Y676 258 aaKnown RBP13.94□□□□□ -0.18
VRK3-207ENST00000594092 CYP7B1O75881 506 aa13.93□□□□□ -0.18
VRK3-207ENST00000594092 OR5F1O95221 314 aa13.93□□□□□ -0.18
VRK3-207ENST00000594092 THY1P04216 161 aa13.93□□□□□ -0.18
VRK3-207ENST00000594092 CBLP22681 906 aa13.93□□□□□ -0.18
VRK3-207ENST00000594092 ACAA2P42765 397 aaKnown RBP13.93□□□□□ -0.18
VRK3-207ENST00000594092 GTF2A1P52655 376 aaPredicted RBP13.93□□□□□ -0.18
VRK3-207ENST00000594092 NPRL3Q12980 569 aa13.93□□□□□ -0.18
VRK3-207ENST00000594092 PODNL1Q6PEZ8 512 aa13.93□□□□□ -0.18
VRK3-207ENST00000594092 IGF2-ASQ6U949 168 aa13.93□□□□□ -0.18
VRK3-207ENST00000594092 DTX1Q86Y01 620 aa13.93□□□□□ -0.18
VRK3-207ENST00000594092 LINC00471Q8N535 108 aa13.93□□□□□ -0.18
VRK3-207ENST00000594092 GATSQ8NAP1 163 aa13.93□□□□□ -0.18
VRK3-207ENST00000594092 SETD9Q8NE22 299 aa13.93□□□□□ -0.18
VRK3-207ENST00000594092 FAM71CQ8NEG0 241 aa13.93□□□□□ -0.18
VRK3-207ENST00000594092 NIPSNAP1Q9BPW8 284 aa13.93□□□□□ -0.18
VRK3-207ENST00000594092 POLR2J2Q9GZM3 115 aaKnown RBP13.93□□□□□ -0.18
VRK3-207ENST00000594092 POLR2J3Q9H1A7 115 aaKnown RBP13.93□□□□□ -0.18
VRK3-207ENST00000594092 FBXL4Q9UKA2 621 aa13.93□□□□□ -0.18
VRK3-207ENST00000594092 PCSK5Q92824 1860 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 SH3PXD2BA1X283 911 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 MASP2O00187 686 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 OR10H3O60404 316 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 OR2J2O76002 312 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 HPP00738 406 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 ST3GAL3Q11203 375 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 OR1Q1Q15612 314 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 ZNF770Q6IQ21 691 aaPredicted RBP13.92□□□□□ -0.18
VRK3-207ENST00000594092 LYPD8Q6UX82 237 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 ZNF550Q7Z398 422 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 GDF7Q7Z4P5 450 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 MRGPREQ86SM8 312 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 IL22RA1Q8N6P7 574 aa13.92□□□□□ -0.18
VRK3-207ENST00000594092 POGLUT1Q8NBL1 392 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms