RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 PRSS44E7EML9 344 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 TO15178 435 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 CLOCKO15516 846 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 ZNF354AO60765 605 aaPredicted RBP10.9□□□□□ -0.66
DDX39A-219ENST00000592927 STX11O75558 287 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 FABP3P05413 133 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 CHRM4P08173 479 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 FBXO45P0C2W1 286 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 ITGA2P17301 1181 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 ABCD3P28288 659 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 KRT20P35900 424 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 KCNJ5P48544 419 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 TMED10P49755 219 aaKnown RBP10.9□□□□□ -0.66
DDX39A-219ENST00000592927 PSG6Q00889 435 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 PLCXD2Q0VAA5 305 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 OR1C1Q15619 314 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 CYP27C1Q4G0S4 372 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 RPS26P11Q5JNZ5 115 aaPredicted RBP10.9□□□□□ -0.66
DDX39A-219ENST00000592927 DCST2Q5T1A1 773 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 ZNF468Q5VIY5 522 aaPredicted RBP10.9□□□□□ -0.66
DDX39A-219ENST00000592927 IL20RBQ6UXL0 311 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 PACS2Q86VP3 889 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 ZDHHC21Q8IVQ6 265 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 DND1Q8IYX4 353 aaKnown RBP10.9□□□□□ -0.66
DDX39A-219ENST00000592927 PRR22Q8IZ63 422 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 CYP4Z2PQ8N1L4 340 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 OIT3Q8WWZ8 545 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 SPACA9Q96E40 222 aaPredicted RBP10.9□□□□□ -0.66
DDX39A-219ENST00000592927 OMA1Q96E52 524 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 TPD52L3Q96J77 140 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 COL21A1Q96P44 957 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 SDF2Q99470 211 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 PINK1Q9BXM7 581 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 KLHL4Q9C0H6 718 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 ZNF350Q9GZX5 532 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 SAP130Q9H0E3 1048 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 SLC38A1Q9H2H9 487 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 VCXQ9H320 206 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 EVA1AQ9H8M9 152 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 LRFN1Q9P244 771 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 SEC14L3Q9UDX4 400 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 MRTO4Q9UKD2 239 aaKnown RBP10.9□□□□□ -0.66
DDX39A-219ENST00000592927 CNOT11Q9UKZ1 510 aaKnown RBP10.9□□□□□ -0.66
DDX39A-219ENST00000592927 IFT52Q9Y366 437 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 WDR45Q9Y484 360 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 NPFFR2Q9Y5X5 522 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 KCNE3Q9Y6H6 103 aa10.9□□□□□ -0.66
DDX39A-219ENST00000592927 NINQ8N4C6 2090 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 TRAV17A0A0B4J275 112 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 TMEM229AB2RXF0 380 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 SYT5O00445 386 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 TPST1O60507 370 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 REM1O75628 298 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 PPM1BO75688 479 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 PRSS23O95084 383 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 CST1P01037 141 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 OPN1SWP03999 348 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 CD46P15529 392 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 NAGAP17050 411 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 CD247P20963 164 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 IL12BP29460 328 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 TNFSF10P50591 281 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 KCNJ10P78508 379 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 GK3PQ14409 553 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 DECR1Q16698 335 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 ZSWIM7Q19AV6 140 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 ZNF791Q3KP31 576 aaPredicted RBP10.89□□□□□ -0.67
DDX39A-219ENST00000592927 SPINK14Q6IE38 97 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 HMBOX1Q6NT76 420 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 LYPD8Q6UX82 237 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 FRRS1Q6ZNA5 592 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 RTL4Q6ZR62 310 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 GDF7Q7Z4P5 450 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 VTCN1Q7Z7D3 282 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 GALNT10Q86SR1 603 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 ZNF619Q8N2I2 560 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 RBMXL3Q8N7X1 1067 aaKnown RBP10.89□□□□□ -0.67
DDX39A-219ENST00000592927 OR4N2Q8NGD1 307 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 OR5M3Q8NGP4 307 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 SPPL2AQ8TCT8 520 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 NRG4Q8WWG1 115 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 PIK3R3Q92569 461 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 PROX1Q92786 737 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 TMBIM1Q969X1 311 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 SNRNP40Q96DI7 357 aaKnown RBP10.89□□□□□ -0.67
DDX39A-219ENST00000592927 OTUB1Q96FW1 271 aaPredicted RBP10.89□□□□□ -0.67
DDX39A-219ENST00000592927 C7orf34Q96L11 122 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 SGCZQ96LD1 299 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 SIGLEC12Q96PQ1 595 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 ZNF347Q96SE7 839 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 G6PC3Q9BUM1 346 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 C9orf16Q9BUW7 83 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 PRDM4Q9UKN5 801 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 CBLCQ9ULV8 474 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 ZNF232Q9UNY5 417 aa10.89□□□□□ -0.67
DDX39A-219ENST00000592927 MED13LQ71F56 2210 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 GXYLT2A0PJZ3 443 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 H0YJX3 145 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 GNGT2O14610 69 aa10.88□□□□□ -0.67
DDX39A-219ENST00000592927 TP53I11O14683 189 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms