RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 OR2M5A3KFT3 312 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 NKX2-6A6NCS4 301 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 CD8B2A6NJW9 211 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 CLCA1A8K7I4 914 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 SHISA8B8ZZ34 492 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 ZNF264O43296 627 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 FCMRO60667 390 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 ZCCHC18P0CG32 403 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 GRNP28799 593 aaKnown RBP9.11□□□□□ -0.95
BRCA1-227ENST00000591849 TIMP3P35625 211 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 ADH7P40394 386 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 EIF1P41567 113 aaKnown RBP9.11□□□□□ -0.95
BRCA1-227ENST00000591849 LHX2P50458 406 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 ATP4BP51164 291 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 SF3A3Q12874 501 aaKnown RBP eCLIP9.11□□□□□ -0.95
BRCA1-227ENST00000591849 CBFBQ13951 182 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 CD226Q15762 336 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 SLC25A35Q3KQZ1 300 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.11□□□□□ -0.95
BRCA1-227ENST00000591849 PDSS1Q5T2R2 415 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 SLC2A7Q6PXP3 512 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 EIF3MQ7L2H7 374 aaKnown RBP9.11□□□□□ -0.95
BRCA1-227ENST00000591849 OLIG3Q7RTU3 272 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 ZNF619Q8N2I2 560 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 ATP6V1C2Q8NEY4 427 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 TNIP2Q8NFZ5 429 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 TM9SF2Q99805 663 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 TPT1P8Q9HAU6 139 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 THUMPD1Q9NXG2 353 aaKnown RBP9.11□□□□□ -0.95
BRCA1-227ENST00000591849 CALML5Q9NZT1 146 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 Q9UFV3 132 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 AP4B1Q9Y6B7 739 aa9.11□□□□□ -0.95
BRCA1-227ENST00000591849 SLC22A20A6NK97 555 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 EVPLLA8MZ36 301 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 C5orf58C9J3I9 102 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 CLIC1O00299 241 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 HMGN4O00479 90 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 EIF1AYO14602 144 aaKnown RBP9.1□□□□□ -0.95
BRCA1-227ENST00000591849 TNFRSF21O75509 655 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 SYNGR4O95473 234 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 H6PDO95479 791 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 OPN1LWP04000 364 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 UBTFL6P0CB48 400 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-227ENST00000591849 TMIGD3P0DMS9 266 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-227ENST00000591849 ZNF708P17019 499 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 BMP5P22003 454 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 CTSSP25774 331 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 MAGEA8P43361 318 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 ARFIP2P53365 341 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 SUMO3P55854 103 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-227ENST00000591849 CLDN15P56746 228 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 CLDN18P56856 261 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 B3GALT5-AS1P59052 145 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 DSTNP60981 165 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 ZNF117Q03924 483 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 CHRNEQ04844 493 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 CDSNQ15517 529 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 ZNF141Q15928 474 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 SYPL1Q16563 259 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 NDUFAF6Q330K2 333 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 COX20Q5RI15 118 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 HEPHL1Q6MZM0 1159 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 BLOC1S3Q6QNY0 202 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 MEX3BQ6ZN04 569 aaKnown RBP9.1□□□□□ -0.95
BRCA1-227ENST00000591849 LRRC74BQ6ZQY2 392 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 GTPBP8Q8N3Z3 284 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-227ENST00000591849 ANKFN1Q8N957 763 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 OR5W2Q8NH69 310 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 ZNF563Q8TA94 476 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 ZFP90Q8TF47 636 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 GTF2H4Q92759 462 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 WNT2BQ93097 391 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 MARVELD3Q96A59 401 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 RNF145Q96MT1 663 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 TRNT1Q96Q11 434 aaKnown RBP9.1□□□□□ -0.95
BRCA1-227ENST00000591849 TMEM120AQ9BXJ8 343 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 PINK1Q9BXM7 581 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 ZNF350Q9GZX5 532 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 LAT2Q9GZY6 243 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 MTHFD2LQ9H903 347 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-227ENST00000591849 SERINC1Q9NRX5 453 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 TMEM45AQ9NWC5 275 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 P2RX2Q9UBL9 471 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.1□□□□□ -0.95
BRCA1-227ENST00000591849 ZNF232Q9UNY5 417 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 SLC35A3Q9Y2D2 325 aa9.1□□□□□ -0.95
BRCA1-227ENST00000591849 TEP1Q99973 2627 aaKnown RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 A0A096LPI6 279 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 MBD3L4A6NDZ8 208 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 MBD3L3A6NE82 208 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 MBD3L5A6NJ08 208 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 GJE1A6NN92 205 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 EEF1E1-BLOC1S5C9J1V9 151 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 NPIPB9F8W1W9 429 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 ANGPT2O15123 496 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 EEF1E1O43324 174 aaKnown RBP9.09□□□□□ -0.95
BRCA1-227ENST00000591849 OIP5O43482 229 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 KIAA0513O60268 411 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 UGT2B17O75795 530 aa9.09□□□□□ -0.95
BRCA1-227ENST00000591849 GUSBP08236 651 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms