RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 KLHL28Q9NXS3 571 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 C6orf203Q9P0P8 240 aaPredicted RBP9.34□□□□□ -0.91
VPS4B-207ENST00000591519 ABCA2Q9BZC7 2435 aa9.34□□□□□ -0.91
VPS4B-207ENST00000591519 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 A0A087WZY1 265 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 GXYLT2A0PJZ3 443 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 C7orf72A4D263 438 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 FAM171A2A8MVW0 826 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 H3BML4 177 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 ADAMDEC1O15204 470 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 AQP8O94778 261 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 FGF4P08620 206 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 FCGR2AP12318 317 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 PPP3CBP16298 524 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 ZNF17P17021 662 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 TBXA2RP21731 343 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 PSMA4P25789 261 aaKnown RBP9.33□□□□□ -0.92
VPS4B-207ENST00000591519 LOXP28300 417 aaPredicted RBP9.33□□□□□ -0.92
VPS4B-207ENST00000591519 CCKARP32238 428 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 SERPINB5P36952 375 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 LTBQ06643 244 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 BST1Q10588 318 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 STX5Q13190 355 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 PDE7AQ13946 482 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 UGT3A2Q3SY77 523 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 VPS26BQ4G0F5 336 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 RFTN2Q52LD8 501 aaPredicted RBP9.33□□□□□ -0.92
VPS4B-207ENST00000591519 EXOSC6Q5RKV6 272 aaKnown RBP9.33□□□□□ -0.92
VPS4B-207ENST00000591519 ANKRD26P1Q6NSI1 321 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 OR5M1Q8NGP8 315 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 GPR151Q8TDV0 419 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 ARSGQ96EG1 525 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 GIMAP5Q96F15 307 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 ADGRG7Q96K78 797 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 TSSK3Q96PN8 268 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 SORT1Q99523 831 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 CCT7Q99832 543 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 SMR3AQ99954 134 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 MED18Q9BUE0 208 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 C1orf50Q9BV19 199 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 REEP4Q9H6H4 257 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 ACSS1Q9NUB1 689 aaPredicted RBP9.33□□□□□ -0.92
VPS4B-207ENST00000591519 PNPOQ9NVS9 261 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 BAIAP2L1Q9UHR4 511 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 PROCRQ9UNN8 238 aa9.33□□□□□ -0.92
VPS4B-207ENST00000591519 LSM1O15116 133 aaKnown RBP9.32□□□□□ -0.92
VPS4B-207ENST00000591519 SEC14L5O43304 696 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 NDUFB5O43674 189 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 SMPD2O60906 423 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 SASH3O75995 380 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 KITP10721 976 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 PAX1P15863 534 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 ADSLP30566 484 aaPredicted RBP9.32□□□□□ -0.92
VPS4B-207ENST00000591519 SLC6A8P48029 635 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 RAC1P63000 192 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 SIRPAP78324 504 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 SGCBQ16585 318 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 CTU2Q2VPK5 515 aaKnown RBP9.32□□□□□ -0.92
VPS4B-207ENST00000591519 GRAMD1BQ3KR37 738 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 CPTPQ5TA50 214 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 C20orf204Q6ZNR8 217 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 P3H2Q8IVL5 708 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 WDR75Q8IWA0 830 aaKnown RBP9.32□□□□□ -0.92
VPS4B-207ENST00000591519 GTPBP8Q8N3Z3 284 aaPredicted RBP9.32□□□□□ -0.92
VPS4B-207ENST00000591519 SLC16A11Q8NCK7 471 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 NUP43Q8NFH3 380 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 OR6K3Q8NGY3 331 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 ZFP28Q8NHY6 868 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 IGFBPL1Q8WX77 278 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 PIK3R3Q92569 461 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 ZBTB8AQ96BR9 441 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 TUBGCP3Q96CW5 907 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 MTERF3Q96E29 417 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 ZBED6CLQ96FA7 236 aaPredicted RBP9.32□□□□□ -0.92
VPS4B-207ENST00000591519 PIK3IP1Q96FE7 263 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 GMPPAQ96IJ6 420 aaPredicted RBP9.32□□□□□ -0.92
VPS4B-207ENST00000591519 ATP6V1G3Q96LB4 118 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 OR10A4Q9H209 315 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 UBQLN4Q9NRR5 601 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 GLRX2Q9NS18 164 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 GIN1Q9NXP7 522 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 MARCOQ9UEW3 520 aaPredicted RBP9.32□□□□□ -0.92
VPS4B-207ENST00000591519 TMED5Q9Y3A6 229 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 RAP2CQ9Y3L5 183 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 RAI1Q7Z5J4 1906 aaPredicted RBP9.32□□□□□ -0.92
VPS4B-207ENST00000591519 DSCAMO60469 2012 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 HEATR5AQ86XA9 2040 aa9.32□□□□□ -0.92
VPS4B-207ENST00000591519 UQCRHLA0A096LP55 91 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 A0A1W2PQD3 144 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 PDPK1O15530 556 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 KLF4O43474 513 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 SS18L1O75177 396 aaPredicted RBP9.31□□□□□ -0.92
VPS4B-207ENST00000591519 SOX30O94993 753 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 KCNK2O95069 426 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 OXSR1O95747 527 aaPredicted RBP9.31□□□□□ -0.92
VPS4B-207ENST00000591519 HEXAP06865 529 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 THBDP07204 575 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 ACP2P11117 423 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 NID1P14543 1247 aa9.31□□□□□ -0.92
VPS4B-207ENST00000591519 SDC1P18827 310 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms