RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 PDZK1Q5T2W1 519 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 AP1ARQ63HQ0 302 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 CBLN3Q6UW01 205 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 OLIG3Q7RTU3 272 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 UBQLNLQ8IYU4 475 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 GTPBP8Q8N3Z3 284 aaPredicted RBP8.3□□□□□ -1.08
DNMT1-223ENST00000591239 MEIOBQ8N635 442 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 ZNF614Q8N883 585 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 C9orf106Q8NAJ2 232 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 NAXEQ8NCW5 288 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 B4GALNT2Q8NHY0 566 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 MBD3L2Q8NHZ7 208 aaPredicted RBP8.3□□□□□ -1.08
DNMT1-223ENST00000591239 PNPT1Q8TCS8 783 aaKnown RBP8.3□□□□□ -1.08
DNMT1-223ENST00000591239 WNT2BQ93097 391 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 ROPN1LQ96C74 230 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 THOC1Q96FV9 657 aaKnown RBP8.3□□□□□ -1.08
DNMT1-223ENST00000591239 ITCHQ96J02 903 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 UCN2Q96RP3 112 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 NPAS1Q99742 590 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 KLHDC3Q9BQ90 382 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 POLE3Q9NRF9 147 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 MED17Q9NVC6 651 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 CLCF1Q9UBD9 225 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 ZNF629Q9UEG4 869 aaPredicted RBP8.3□□□□□ -1.08
DNMT1-223ENST00000591239 KCNE5Q9UJ90 142 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 CARD8Q9Y2G2 431 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 WDR45Q9Y484 360 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 AP4B1Q9Y6B7 739 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 KIAA1549Q9HCM3 1950 aa8.3□□□□□ -1.08
DNMT1-223ENST00000591239 PKDREJQ9NTG1 2253 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 UQCRHLA0A096LP55 91 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 CENPVL1A0A0U1RR11 272 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 PRAMEF27A3QJZ7 478 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 C7orf72A4D263 438 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 SERINC4A6NH21 518 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 DVL2O14641 736 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 ZNF264O43296 627 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 OIP5O43482 229 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 KIAA0513O60268 411 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 TNFRSF21O75509 655 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 UGT2B17O75795 530 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 RCBTB2O95199 551 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 H6PDO95479 791 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 ANP32DO95626 131 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 KRT75O95678 551 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 NUDT14O95848 222 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 LINGO3P0C6S8 592 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 UBL4AP11441 157 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 ZNF17P17021 662 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 BMP5P22003 454 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 MAGEA8P43361 318 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 ANXA11P50995 505 aaKnown RBP8.29□□□□□ -1.08
DNMT1-223ENST00000591239 P2RX1P51575 399 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 ZNF136P52737 540 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 SUCLG1P53597 346 aaKnown RBP8.29□□□□□ -1.08
DNMT1-223ENST00000591239 CLDN20P56880 219 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 EEFSECP57772 596 aaKnown RBP8.29□□□□□ -1.08
DNMT1-223ENST00000591239 IRX1P78414 480 aaPredicted RBP8.29□□□□□ -1.08
DNMT1-223ENST00000591239 FUT5Q11128 374 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 MAPK14Q16539 360 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 NDUFAF6Q330K2 333 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 SLC25A35Q3KQZ1 300 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 GPAT3Q53EU6 434 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 HSP90B2PQ58FF3 399 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 C6orf10Q5SRN2 563 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 TYW3Q6IPR3 259 aaKnown RBP8.29□□□□□ -1.08
DNMT1-223ENST00000591239 POMZP3Q6PJE2 187 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 BLOC1S3Q6QNY0 202 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 PLXDC2Q6UX71 529 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 DNAJC14Q6Y2X3 702 aaPredicted RBP8.29□□□□□ -1.08
DNMT1-223ENST00000591239 FRRS1Q6ZNA5 592 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 CHMP1BQ7LBR1 199 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 GRAMD2AQ8IUY3 354 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 FUNDC1Q8IVP5 155 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 RFWD2Q8NHY2 731 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 ZFP90Q8TF47 636 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 STON2Q8WXE9 905 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 SMPDL3BQ92485 455 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 GTF2H4Q92759 462 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 ZBTB8AQ96BR9 441 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 ZG16BQ96DA0 208 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 RNF145Q96MT1 663 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 TRNT1Q96Q11 434 aaKnown RBP8.29□□□□□ -1.08
DNMT1-223ENST00000591239 TM9SF2Q99805 663 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 SPOCK3Q9BQ16 436 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 SAP130Q9H0E3 1048 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 ENKD1Q9H0I2 346 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 RUBCNLQ9H714 662 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 NPHS2Q9NP85 383 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 CCDC167Q9P0B6 97 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 STOML1Q9UBI4 398 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 DCTN4Q9UJW0 460 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 ICAM5Q9UMF0 924 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 LIPT1Q9Y234 373 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 PCDHB14Q9Y5E9 798 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 CACNA1DQ01668 2161 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 CSMD2Q7Z408 3487 aa8.29□□□□□ -1.08
DNMT1-223ENST00000591239 CSMD1Q96PZ7 3565 aa8.28□□□□□ -1.08
DNMT1-223ENST00000591239 ABCA12Q86UK0 2595 aa8.28□□□□□ -1.08
DNMT1-223ENST00000591239 SEC14L5O43304 696 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms