RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 DTNAQ9Y4J8 743 aa10.9□□□□□ -0.66
TPM4-212ENST00000590180 USH1CQ9Y6N9 552 aa10.9□□□□□ -0.66
TPM4-212ENST00000590180 SPG11Q96JI7 2443 aa10.9□□□□□ -0.66
TPM4-212ENST00000590180 HCFC1P51610 2035 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 HMGB1P1B2RPK0 211 aaPredicted RBP10.89□□□□□ -0.67
TPM4-212ENST00000590180 EIF1AYO14602 144 aaKnown RBP10.89□□□□□ -0.67
TPM4-212ENST00000590180 ZNF195O14628 629 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 OIP5O43482 229 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 TNFRSF21O75509 655 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 IL6P05231 212 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 H2AFXP16104 143 aaPredicted RBP10.89□□□□□ -0.67
TPM4-212ENST00000590180 IGFBP2P18065 325 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 KIR2DL3P43628 341 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 EIF1AXP47813 144 aaKnown RBP10.89□□□□□ -0.67
TPM4-212ENST00000590180 EEF1A1P68104 462 aaKnown RBP10.89□□□□□ -0.67
TPM4-212ENST00000590180 ZNF117Q03924 483 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 TMEM44Q2T9K0 475 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.89□□□□□ -0.67
TPM4-212ENST00000590180 PDZK1Q5T2W1 519 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 EEF1A1P5Q5VTE0 462 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 SAXO2Q658L1 398 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 OR2A2Q6IF42 318 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 CBLN3Q6UW01 205 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 EPGNQ6UW88 154 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 RNF130Q86XS8 419 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 GTPBP8Q8N3Z3 284 aaPredicted RBP10.89□□□□□ -0.67
TPM4-212ENST00000590180 TMCO5AQ8N6Q1 288 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 CNEP1R1Q8N9A8 125 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 CHDHQ8NE62 594 aaPredicted RBP10.89□□□□□ -0.67
TPM4-212ENST00000590180 MIPOL1Q8TD10 442 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 FIG4Q92562 907 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 ZBTB8AQ96BR9 441 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 NEURL3Q96EH8 262 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 C14orf79Q96F83 325 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 RNF145Q96MT1 663 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 C7orf26Q96N11 449 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 DOCK7Q96N67 2140 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 SH3GL2Q99962 352 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 TREX2Q9BQ50 279 aaPredicted RBP10.89□□□□□ -0.67
TPM4-212ENST00000590180 VIPAS39Q9H9C1 493 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 SLCO1B3Q9NPD5 702 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 INTS9Q9NV88 658 aaKnown RBP10.89□□□□□ -0.67
TPM4-212ENST00000590180 CLCF1Q9UBD9 225 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 KCNN3Q9UGI6 736 aa10.89□□□□□ -0.67
TPM4-212ENST00000590180 FOXD3Q9UJU5 478 aaPredicted RBP10.89□□□□□ -0.67
TPM4-212ENST00000590180 KIAA1549Q9HCM3 1950 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 SERINC4A6NH21 518 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 NPIPB9F8W1W9 429 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 RFXANKO14593 260 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 ZNF264O43296 627 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 EIF4E2O60573 245 aaKnown RBP10.88□□□□□ -0.67
TPM4-212ENST00000590180 ANP32DO95626 131 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 ME2P23368 584 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 EIF1P41567 113 aaKnown RBP10.88□□□□□ -0.67
TPM4-212ENST00000590180 CDKN2CP42773 168 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 CPA2P48052 419 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 KHKP50053 298 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 ANXA11P50995 505 aaKnown RBP10.88□□□□□ -0.67
TPM4-212ENST00000590180 P2RX1P51575 399 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 CCR4P51679 360 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 KRTAP10-9P60411 292 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 RAC1P63000 192 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 PPP2R2AP63151 447 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 LRRC74AQ0VAA2 488 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 PLPPR5Q32ZL2 321 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 NDUFAF6Q330K2 333 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 GPAT3Q53EU6 434 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 LUZP2Q86TE4 346 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 KIF18BQ86Y91 864 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 ZZZ3Q8IYH5 903 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 MIER2Q8N344 545 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 ATP6V1C2Q8NEY4 427 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 FBXO27Q8NI29 283 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 POC1BQ8TC44 478 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 ROPN1LQ96C74 230 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 ZNF845Q96IR2 970 aaPredicted RBP10.88□□□□□ -0.67
TPM4-212ENST00000590180 LURAP1Q96LR2 239 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 NPAS1Q99742 590 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 KLHDC3Q9BQ90 382 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 SFXN3Q9BWM7 321 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 TMEM185BQ9H7F4 350 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 MCCC2Q9HCC0 563 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 ZIM2Q9NZV7 527 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 WDR45Q9Y484 360 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 POLQO75417 2590 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 MED12LQ86YW9 2145 aa10.88□□□□□ -0.67
TPM4-212ENST00000590180 MYO9AB2RTY4 2548 aa10.87□□□□□ -0.67
TPM4-212ENST00000590180 POLR3GO15318 223 aaPredicted RBP10.87□□□□□ -0.67
TPM4-212ENST00000590180 SMNDC1O75940 238 aaKnown RBP eCLIP10.87□□□□□ -0.67
TPM4-212ENST00000590180 TGDSO95455 350 aa10.87□□□□□ -0.67
TPM4-212ENST00000590180 KRT75O95678 551 aa10.87□□□□□ -0.67
TPM4-212ENST00000590180 CSTAP01040 98 aa10.87□□□□□ -0.67
TPM4-212ENST00000590180 C1QCP02747 245 aa10.87□□□□□ -0.67
TPM4-212ENST00000590180 LINGO3P0C6S8 592 aa10.87□□□□□ -0.67
TPM4-212ENST00000590180 UBL4AP11441 157 aa10.87□□□□□ -0.67
TPM4-212ENST00000590180 ZNF17P17021 662 aa10.87□□□□□ -0.67
TPM4-212ENST00000590180 PEX19P40855 299 aa10.87□□□□□ -0.67
TPM4-212ENST00000590180 IDH3AP50213 366 aa10.87□□□□□ -0.67
TPM4-212ENST00000590180 POLR2JP52435 117 aaKnown RBP10.87□□□□□ -0.67
TPM4-212ENST00000590180 AQP5P55064 265 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms