RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 SYNGR4O95473 234 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 CPSF4O95639 269 aaKnown RBP9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 UQCRC2P22695 453 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 ELK4P28324 431 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 S100A3P33764 101 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 CHI3L1P36222 383 aaPredicted RBP9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 P2RX1P51575 399 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 AGFG1P52594 562 aaKnown RBP9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 ART1P52961 327 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 ATP12AP54707 1039 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 TXNL4AP83876 142 aaKnown RBP9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 PON3Q15166 354 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 PLPPR5Q32ZL2 321 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 NXNQ6DKJ4 435 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 POMZP3Q6PJE2 187 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 APOOLQ6UXV4 268 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 CLECL1Q8IZS7 167 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 GTPBP8Q8N3Z3 284 aaPredicted RBP9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 GOLGA6L1Q8N7Z2 621 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 TOR1AIP2Q8NFQ8 470 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 OR5M1Q8NGP8 315 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 OR4C3Q8NH37 302 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 OIT3Q8WWZ8 545 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 RTN4RQ9BZR6 473 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 ZNF395Q9H8N7 513 aaPredicted RBP9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 TMBIM4Q9HC24 238 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 FANCFQ9NPI8 374 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 MED17Q9NVC6 651 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 PNPOQ9NVS9 261 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 AIG1Q9NVV5 245 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 ARGLU1Q9NWB6 273 aaPredicted RBP9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 DNAJB12Q9NXW2 375 aaKnown RBP9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 CRIM1Q9NZV1 1036 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 JKAMPQ9P055 326 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 EMC9Q9Y3B6 208 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 ZNF337Q9Y3M9 751 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 VPS13CQ709C8 3753 aa9.55□□□□□ -0.88
CLPTM1-211ENST00000589347 ABCA4P78363 2273 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 PRSS51A0A1B0GVH4 220 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 SDHDO14521 159 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 MSTNO14793 375 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 SNNO75324 88 aaPredicted RBP9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 STX11O75558 287 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 PLGP00747 810 aaPredicted RBP9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 KITP10721 976 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 UBL4AP11441 157 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 IDO1P14902 403 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 EIF1AXP47813 144 aaKnown RBP9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 CCR4P51679 360 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 CLDN15P56746 228 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 FOXF2Q12947 444 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 CBFBQ13951 182 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 TMEM44Q2T9K0 475 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 FAM174BQ3ZCQ3 159 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 SPANXN4Q5MJ08 99 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 BEND6Q5SZJ8 279 aaPredicted RBP9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 AGBL2Q5U5Z8 902 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 ESPNLQ6ZVH7 1005 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 C6orf120Q7Z4R8 191 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 ZAR1Q86SH2 424 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 ANKRD46Q86W74 232 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 GLB1L3Q8NCI6 653 aaPredicted RBP9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 CHDHQ8NE62 594 aaPredicted RBP9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 OR5D16Q8NGK9 328 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 ZBTB9Q96C00 473 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 TLCD1Q96CP7 247 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 ZNF845Q96IR2 970 aaPredicted RBP9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 RNF145Q96MT1 663 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 POLDIP3Q9BY77 421 aaKnown RBP9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 C20orf27Q9GZN8 174 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 NMUR2Q9GZQ4 415 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 CXXC4Q9H2H0 198 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 CLEC4MQ9H2X3 399 aaPredicted RBP9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 TIGARQ9NQ88 270 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 POLE3Q9NRF9 147 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 GALNT8Q9NY28 637 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 MARCOQ9UEW3 520 aaPredicted RBP9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 NDRG3Q9UGV2 375 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 PROCRQ9UNN8 238 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 DTNAQ9Y4J8 743 aa9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 GPC6Q9Y625 555 aaPredicted RBP9.54□□□□□ -0.88
CLPTM1-211ENST00000589347 NPIPA5A0A0B4J1W7 369 aa9.53□□□□□ -0.88
CLPTM1-211ENST00000589347 A6NNC1 897 aa9.53□□□□□ -0.88
CLPTM1-211ENST00000589347 SHISA8B8ZZ34 492 aa9.53□□□□□ -0.88
CLPTM1-211ENST00000589347 NPIPA7E9PJI5 369 aa9.53□□□□□ -0.88
CLPTM1-211ENST00000589347 ZNF264O43296 627 aa9.53□□□□□ -0.88
CLPTM1-211ENST00000589347 EIF4E2O60573 245 aaKnown RBP9.53□□□□□ -0.88
CLPTM1-211ENST00000589347 TGM6O95932 706 aa9.53□□□□□ -0.88
CLPTM1-211ENST00000589347 NPIPA8P0DM63 369 aa9.53□□□□□ -0.88
CLPTM1-211ENST00000589347 EPXP11678 715 aa9.53□□□□□ -0.88
CLPTM1-211ENST00000589347 ADH6P28332 368 aa9.53□□□□□ -0.88
CLPTM1-211ENST00000589347 CTBP2P56545 445 aa9.53□□□□□ -0.88
CLPTM1-211ENST00000589347 CLDN20P56880 219 aa9.53□□□□□ -0.88
CLPTM1-211ENST00000589347 WDR4P57081 412 aaKnown RBP9.53□□□□□ -0.88
CLPTM1-211ENST00000589347 RPS26P62854 115 aaKnown RBP9.53□□□□□ -0.88
CLPTM1-211ENST00000589347 RAC1P63000 192 aa9.53□□□□□ -0.88
CLPTM1-211ENST00000589347 SIRPAP78324 504 aa9.53□□□□□ -0.88
CLPTM1-211ENST00000589347 ZNF117Q03924 483 aa9.53□□□□□ -0.88
CLPTM1-211ENST00000589347 FOXF1Q12946 379 aa9.53□□□□□ -0.88
CLPTM1-211ENST00000589347 SELENBP1Q13228 472 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms