RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 RBM4Q9BWF3 364 aaKnown RBP20.43■□□□□ 0.86
ATG4D-209ENST00000588857 OSBPL10Q9BXB5 764 aa20.43■□□□□ 0.86
ATG4D-209ENST00000588857 CTPS2Q9NRF8 586 aa20.43■□□□□ 0.86
ATG4D-209ENST00000588857 TMCC3Q9ULS5 477 aa20.43■□□□□ 0.86
ATG4D-209ENST00000588857 YARS2Q9Y2Z4 477 aaKnown RBP20.43■□□□□ 0.86
ATG4D-209ENST00000588857 A0A1W2PQD3 144 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 FMO6PO60774 539 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 ITGA10O75578 1167 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 UBL4AP11441 157 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 PRG2P13727 222 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 PRKACGP22612 351 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 EVI2BP34910 448 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 HSPA13P48723 471 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 CLK3P49761 638 aaKnown RBP20.42■□□□□ 0.86
ATG4D-209ENST00000588857 RPS19BP1Q86WX3 136 aaKnown RBP20.42■□□□□ 0.86
ATG4D-209ENST00000588857 ZNF440Q8IYI8 595 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 OFCC1Q8IZS5 231 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 GIPC3Q8TF64 312 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 ALPK1Q96QP1 1244 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 ZNF559Q9BR84 538 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 POLR2J2Q9GZM3 115 aaKnown RBP20.42■□□□□ 0.86
ATG4D-209ENST00000588857 GABARAPL1Q9H0R8 117 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 POLR2J3Q9H1A7 115 aaKnown RBP20.42■□□□□ 0.86
ATG4D-209ENST00000588857 LRRC42Q9Y546 428 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 HEATR5AQ86XA9 2040 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 PCSK5Q92824 1860 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 DMXL2Q8TDJ6 3036 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 A0A1W2PRQ8 180 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 MASP2O00187 686 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 HPRP00739 348 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 FBXO45P0C2W1 286 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 LIMS1P48059 325 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 PLAURQ03405 335 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 Q0VFX4 171 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 ST3GAL3Q11203 375 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 CHAF1BQ13112 559 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 DGCR6Q14129 220 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 FNDC7Q5VTL7 733 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 FCRLBQ6BAA4 426 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 OPN5Q6U736 354 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 APOOLQ6UXV4 268 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 POGLUT1Q8NBL1 392 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 ADAMTS16Q8TE57 1224 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 TTC9Q92623 222 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 ZNF597Q96LX8 424 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 BARD1Q99728 777 aaKnown RBP20.42■□□□□ 0.86
ATG4D-209ENST00000588857 CDCP1Q9H5V8 836 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 SMURF2Q9HAU4 748 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 KIF17Q9P2E2 1029 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 C15orf41Q9Y2V0 281 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 DOCK10Q96BY6 2186 aa20.42■□□□□ 0.86
ATG4D-209ENST00000588857 ALG1L2C9J202 215 aa20.41■□□□□ 0.86
ATG4D-209ENST00000588857 ZNF264O43296 627 aa20.41■□□□□ 0.86
ATG4D-209ENST00000588857 NDUFB5O43674 189 aa20.41■□□□□ 0.86
ATG4D-209ENST00000588857 FADS1O60427 444 aa20.41■□□□□ 0.86
ATG4D-209ENST00000588857 CCNB2O95067 398 aa20.41■□□□□ 0.86
ATG4D-209ENST00000588857 OR5F1O95221 314 aa20.41■□□□□ 0.86
ATG4D-209ENST00000588857 ALPLP05186 524 aa20.41■□□□□ 0.86
ATG4D-209ENST00000588857 CD226Q15762 336 aa20.41■□□□□ 0.86
ATG4D-209ENST00000588857 MICAQ29983 383 aa20.41■□□□□ 0.86
ATG4D-209ENST00000588857 NDUFAF6Q330K2 333 aa20.41■□□□□ 0.86
ATG4D-209ENST00000588857 DCST1Q5T197 706 aa20.41■□□□□ 0.86
ATG4D-209ENST00000588857 MARCH3Q86UD3 253 aa20.41■□□□□ 0.86
ATG4D-209ENST00000588857 TSPYL5Q86VY4 417 aaPredicted RBP20.41■□□□□ 0.86
ATG4D-209ENST00000588857 SPACA9Q96E40 222 aaPredicted RBP20.41■□□□□ 0.86
ATG4D-209ENST00000588857 TMEM27Q9HBJ8 222 aa20.41■□□□□ 0.86
ATG4D-209ENST00000588857 RYDENQ9NUL5 291 aaKnown RBP20.41■□□□□ 0.86
ATG4D-209ENST00000588857 USE1Q9NZ43 259 aa20.41■□□□□ 0.86
ATG4D-209ENST00000588857 NTNG1Q9Y2I2 539 aa20.41■□□□□ 0.86
ATG4D-209ENST00000588857 ORC6Q9Y5N6 252 aa20.41■□□□□ 0.86
ATG4D-209ENST00000588857 ELAVL4P26378 380 aaKnown RBP20.4■□□□□ 0.86
ATG4D-209ENST00000588857 SSR4P51571 173 aa20.4■□□□□ 0.86
ATG4D-209ENST00000588857 MLF1P58340 268 aa20.4■□□□□ 0.86
ATG4D-209ENST00000588857 PPP2R2BQ00005 443 aa20.4■□□□□ 0.86
ATG4D-209ENST00000588857 TRAM2Q15035 370 aa20.4■□□□□ 0.86
ATG4D-209ENST00000588857 DCAF10Q5QP82 559 aa20.4■□□□□ 0.86
ATG4D-209ENST00000588857 LYPD8Q6UX82 237 aa20.4■□□□□ 0.86
ATG4D-209ENST00000588857 VASH2Q86V25 355 aa20.4■□□□□ 0.86
ATG4D-209ENST00000588857 ARMC10Q8N2F6 343 aa20.4■□□□□ 0.86
ATG4D-209ENST00000588857 TMCO5AQ8N6Q1 288 aa20.4■□□□□ 0.86
ATG4D-209ENST00000588857 ATG16L2Q8NAA4 619 aa20.4■□□□□ 0.86
ATG4D-209ENST00000588857 FAM71CQ8NEG0 241 aa20.4■□□□□ 0.86
ATG4D-209ENST00000588857 OR10G2Q8NGC3 310 aa20.4■□□□□ 0.86
ATG4D-209ENST00000588857 ASB15Q8WXK1 588 aa20.4■□□□□ 0.86
ATG4D-209ENST00000588857 HGDQ93099 445 aa20.4■□□□□ 0.86
ATG4D-209ENST00000588857 SLC41A3Q96GZ6 507 aa20.4■□□□□ 0.86
ATG4D-209ENST00000588857 FER1L6-AS2Q96M78 137 aa20.4■□□□□ 0.86
ATG4D-209ENST00000588857 TRIM2Q9C040 744 aa20.4■□□□□ 0.86
ATG4D-209ENST00000588857 SMPD3Q9NY59 655 aaPredicted RBP20.4■□□□□ 0.86
ATG4D-209ENST00000588857 RAXQ9Y2V3 346 aa20.4■□□□□ 0.86
ATG4D-209ENST00000588857 CACNA1BQ00975 2339 aa20.4■□□□□ 0.86
ATG4D-209ENST00000588857 APC2O95996 2303 aa20.39■□□□□ 0.86
ATG4D-209ENST00000588857 TRBV4-1A0A0J9YWV2 114 aa20.39■□□□□ 0.85
ATG4D-209ENST00000588857 C7orf72A4D263 438 aa20.39■□□□□ 0.85
ATG4D-209ENST00000588857 TRAPPC13A5PLN9 417 aa20.39■□□□□ 0.85
ATG4D-209ENST00000588857 SCO2O43819 266 aa20.39■□□□□ 0.85
ATG4D-209ENST00000588857 FUT4P22083 530 aa20.39■□□□□ 0.85
ATG4D-209ENST00000588857 HTR2AP28223 471 aa20.39■□□□□ 0.85
ATG4D-209ENST00000588857 RYKP34925 604 aa20.39■□□□□ 0.85
ATG4D-209ENST00000588857 SOX3P41225 446 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms