RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 PPM1DO15297 605 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 ARHGEF9O43307 516 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 TMEM127O75204 238 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 SERPINA3P01011 423 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 MT-ND5P03915 603 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 CSF3P09919 207 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 NID1P14543 1247 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 RPS4Y1P22090 263 aaKnown RBP13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 MYL9P24844 172 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 PEBP1P30086 187 aaKnown RBP13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 GDI1P31150 447 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 RBM34P42696 430 aaKnown RBP13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 WASP42768 502 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 MAP2K3P46734 347 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 GCGRP47871 477 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 EVX1P49640 407 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 PDX1P52945 283 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 ADPRHP54922 357 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 EEF1A1P68104 462 aaKnown RBP13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 SHC2P98077 582 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 FABP5Q01469 135 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 HTR4Q13639 388 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 BAK1Q16611 211 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 ATAD3CQ5T2N8 411 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 OR2G6Q5TZ20 316 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 ZNF836Q6ZNA1 936 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 TMPRSS11FQ6ZWK6 438 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 CAMKK1Q8N5S9 505 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 CELF2-AS1Q8N7Q2 184 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 CAPSLQ8WWF8 208 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 TM9SF4Q92544 642 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 CDS1Q92903 461 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 TRIM63Q969Q1 353 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 TMEM203Q969S6 136 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 TRMT61AQ96FX7 289 aaKnown RBP13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 SECISBP2Q96T21 854 aaKnown RBP13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 SDF2Q99470 211 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 SOSTQ9BQB4 213 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 ZNF350Q9GZX5 532 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 MIXL1Q9H2W2 232 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 UBQLN3Q9H347 655 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 KCMF1Q9P0J7 381 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 KLHL21Q9UJP4 597 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 DAPP1Q9UN19 280 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 MED31Q9Y3C7 131 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 KCNE3Q9Y6H6 103 aa13.06□□□□□ -0.32
NEDD4L-223ENST00000588516 DAPL1A0PJW8 107 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 OR5K4A6NMS3 321 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 WASHC1A8K0Z3 465 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 PRR23D1E9PI22 279 aaPredicted RBP13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 SGK494L7N484 410 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 GABRPO00591 440 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 ORC5O43913 435 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 PRKRAO75569 313 aaKnown RBP13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 ATP1B1P05026 303 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 PROS1P07225 676 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 GSTT2P0CG29 244 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 GSTT2BP0CG30 244 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 PRR23D2P0DMB1 279 aaPredicted RBP13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 CELP19835 753 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 RFX2P48378 723 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 PSMD4P55036 377 aaKnown RBP13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 CTBP2P56545 445 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 CLEC12AQ5QGZ9 265 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 C6orf132Q5T0Z8 1188 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 SLC30A6Q6NXT4 461 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 FIGLAQ6QHK4 219 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 VN1R4Q7Z5H5 301 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 LHFPL3Q86UP9 236 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 NKAIN4Q8IVV8 208 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 SFTPA1Q8IWL2 248 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 TRIM48Q8IWZ4 208 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 Q8N402 240 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 LNX2Q8N448 690 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 MS4A15Q8N5U1 240 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 ARIH2OSQ8N7S6 290 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 COX18Q8N8Q8 333 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 DUSP18Q8NEJ0 188 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 OR7G2Q8NG99 324 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 OR4Q3Q8NH05 313 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 GRPEL2Q8TAA5 225 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 FANK1Q8TC84 345 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 TMEM239Q8WW34 195 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 KLK6Q92876 244 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 SAMD8Q96LT4 415 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 UBL7Q96S82 380 aaPredicted RBP13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 NDC1Q9BTX1 674 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 TRIM2Q9C040 744 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 TWSG1Q9GZX9 223 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.05□□□□□ -0.327e-7■■■■□ 22.6
NEDD4L-223ENST00000588516 SLA2Q9H6Q3 261 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 TRPV5Q9NQA5 729 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 RPRD1BQ9NQG5 326 aaKnown RBP13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 CTPS2Q9NRF8 586 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 RBFOX1Q9NWB1 397 aaKnown RBP13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 COMMD3Q9UBI1 195 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 POU2F3Q9UKI9 436 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 SLC7A7Q9UM01 511 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 GPR52Q9Y2T5 361 aa13.05□□□□□ -0.32
NEDD4L-223ENST00000588516 C2orf74A8MZ97 194 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms