RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 KRTCAP2Q8N6L1 136 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 FNDC5Q8NAU1 212 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 OR2V1Q8NHB1 315 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 B4GALNT2Q8NHY0 566 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 PSMA8Q8TAA3 256 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 KLHL4Q9C0H6 718 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 UBTD1Q9HAC8 227 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 GIN1Q9NXP7 522 aa16.81■□□□□ 0.28
TRIM47-205ENST00000587774 CADP27708 2225 aa16.8■□□□□ 0.28
TRIM47-205ENST00000587774 USF3Q68DE3 2245 aa16.8■□□□□ 0.28
TRIM47-205ENST00000587774 A0A0J9YW62 118 aa16.8■□□□□ 0.28
TRIM47-205ENST00000587774 OIP5O43482 229 aa16.8■□□□□ 0.28
TRIM47-205ENST00000587774 C6orf47O95873 294 aa16.8■□□□□ 0.28
TRIM47-205ENST00000587774 ME2P23368 584 aa16.8■□□□□ 0.28
TRIM47-205ENST00000587774 LOXP28300 417 aaPredicted RBP16.8■□□□□ 0.28
TRIM47-205ENST00000587774 SHC1P29353 583 aa16.8■□□□□ 0.28
TRIM47-205ENST00000587774 SERPINB5P36952 375 aa16.8■□□□□ 0.28
TRIM47-205ENST00000587774 CCT3P49368 545 aaKnown RBP16.8■□□□□ 0.28
TRIM47-205ENST00000587774 CTBP2P56545 445 aa16.8■□□□□ 0.28
TRIM47-205ENST00000587774 IL23RQ5VWK5 629 aa16.8■□□□□ 0.28
TRIM47-205ENST00000587774 HBMQ6B0K9 141 aa16.8■□□□□ 0.28
TRIM47-205ENST00000587774 OR56A1Q8NGH5 318 aa16.8■□□□□ 0.28
TRIM47-205ENST00000587774 PHOSPHO1Q8TCT1 267 aa16.8■□□□□ 0.28
TRIM47-205ENST00000587774 OR5P2Q8WZ92 322 aa16.8■□□□□ 0.28
TRIM47-205ENST00000587774 CAVIN3Q969G5 261 aa16.8■□□□□ 0.28
TRIM47-205ENST00000587774 ACTRT3Q9BYD9 372 aa16.8■□□□□ 0.28
TRIM47-205ENST00000587774 PLSCR4Q9NRQ2 329 aa16.8■□□□□ 0.28
TRIM47-205ENST00000587774 ATAD3AQ9NVI7 634 aa16.8■□□□□ 0.28
TRIM47-205ENST00000587774 GPATCH2Q9NW75 528 aa16.8■□□□□ 0.28
TRIM47-205ENST00000587774 CR1P17927 2039 aa16.79■□□□□ 0.28
TRIM47-205ENST00000587774 LYPLA1O75608 230 aaPredicted RBP16.79■□□□□ 0.28
TRIM47-205ENST00000587774 SYNGR4O95473 234 aa16.79■□□□□ 0.28
TRIM47-205ENST00000587774 THBDP07204 575 aa16.79■□□□□ 0.28
TRIM47-205ENST00000587774 BPGMP07738 259 aa16.79■□□□□ 0.28
TRIM47-205ENST00000587774 ATP6V1C1P21283 382 aa16.79■□□□□ 0.28
TRIM47-205ENST00000587774 SFTPDP35247 375 aa16.79■□□□□ 0.28
TRIM47-205ENST00000587774 SPDYE7PQ495Y7 208 aa16.79■□□□□ 0.28
TRIM47-205ENST00000587774 DCST2Q5T1A1 773 aa16.79■□□□□ 0.28
TRIM47-205ENST00000587774 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.79■□□□□ 0.28
TRIM47-205ENST00000587774 CBLN3Q6UW01 205 aa16.79■□□□□ 0.28
TRIM47-205ENST00000587774 MTERF4Q7Z6M4 381 aaKnown RBP16.79■□□□□ 0.28
TRIM47-205ENST00000587774 RIMKLAQ8IXN7 391 aa16.79■□□□□ 0.28
TRIM47-205ENST00000587774 LILRA2Q8N149 483 aa16.79■□□□□ 0.28
TRIM47-205ENST00000587774 ZNF527Q8NB42 609 aa16.79■□□□□ 0.28
TRIM47-205ENST00000587774 OR5AK3PQ8NH89 298 aa16.79■□□□□ 0.28
TRIM47-205ENST00000587774 SFXN5Q8TD22 340 aa16.79■□□□□ 0.28
TRIM47-205ENST00000587774 AENQ8WTP8 325 aaKnown RBP16.79■□□□□ 0.28
TRIM47-205ENST00000587774 TUBGCP3Q96CW5 907 aa16.79■□□□□ 0.28
TRIM47-205ENST00000587774 KLHL15Q96M94 604 aa16.79■□□□□ 0.28
TRIM47-205ENST00000587774 SMR3AQ99954 134 aa16.79■□□□□ 0.28
TRIM47-205ENST00000587774 FAF1Q9UNN5 650 aaPredicted RBP16.79■□□□□ 0.28
TRIM47-205ENST00000587774 KCNE3Q9Y6H6 103 aa16.79■□□□□ 0.28
TRIM47-205ENST00000587774 HEATR1Q9H583 2144 aaKnown RBP16.78■□□□□ 0.28
TRIM47-205ENST00000587774 TYROBPO43914 113 aa16.78■□□□□ 0.28
TRIM47-205ENST00000587774 NUDT14O95848 222 aa16.78■□□□□ 0.28
TRIM47-205ENST00000587774 NID1P14543 1247 aa16.78■□□□□ 0.28
TRIM47-205ENST00000587774 ELK4P28324 431 aa16.78■□□□□ 0.28
TRIM47-205ENST00000587774 AGTR1P30556 359 aa16.78■□□□□ 0.28
TRIM47-205ENST00000587774 ETV4P43268 484 aa16.78■□□□□ 0.28
TRIM47-205ENST00000587774 ACKR1Q16570 336 aa16.78■□□□□ 0.28
TRIM47-205ENST00000587774 NDUFAF6Q330K2 333 aa16.78■□□□□ 0.28
TRIM47-205ENST00000587774 LSM12Q3MHD2 195 aaKnown RBP16.78■□□□□ 0.28
TRIM47-205ENST00000587774 KLHL26Q53HC5 615 aa16.78■□□□□ 0.28
TRIM47-205ENST00000587774 Q5PR19 223 aa16.78■□□□□ 0.28
TRIM47-205ENST00000587774 SHEQ5VZ18 495 aa16.78■□□□□ 0.28
TRIM47-205ENST00000587774 STAC2Q6ZMT1 411 aa16.78■□□□□ 0.28
TRIM47-205ENST00000587774 OR5D16Q8NGK9 328 aa16.78■□□□□ 0.28
TRIM47-205ENST00000587774 ADAMTS15Q8TE58 950 aa16.78■□□□□ 0.28
TRIM47-205ENST00000587774 COQ8BQ96D53 544 aa16.78■□□□□ 0.28
TRIM47-205ENST00000587774 C18orf12Q96KH6 178 aa16.78■□□□□ 0.28
TRIM47-205ENST00000587774 CCL19Q99731 98 aa16.78■□□□□ 0.28
TRIM47-205ENST00000587774 PIP5K1AQ99755 562 aa16.78■□□□□ 0.28
TRIM47-205ENST00000587774 ROPN1BQ9BZX4 212 aaPredicted RBP16.78■□□□□ 0.28
TRIM47-205ENST00000587774 C12orf49Q9H741 205 aa16.78■□□□□ 0.28
TRIM47-205ENST00000587774 ROPN1Q9HAT0 212 aaPredicted RBP16.78■□□□□ 0.28
TRIM47-205ENST00000587774 ICAM5Q9UMF0 924 aa16.78■□□□□ 0.28
TRIM47-205ENST00000587774 CARD8Q9Y2G2 431 aa16.78■□□□□ 0.28
TRIM47-205ENST00000587774 FN1P02751 2386 aaKnown RBP16.77■□□□□ 0.28
TRIM47-205ENST00000587774 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.77■□□□□ 0.28
TRIM47-205ENST00000587774 SMPD2O60906 423 aa16.77■□□□□ 0.28
TRIM47-205ENST00000587774 KRT16P08779 473 aa16.77■□□□□ 0.28
TRIM47-205ENST00000587774 G6PDP11413 515 aa16.77■□□□□ 0.28
TRIM47-205ENST00000587774 PRPS1L1P21108 318 aa16.77■□□□□ 0.28
TRIM47-205ENST00000587774 SOAT1P35610 550 aa16.77■□□□□ 0.28
TRIM47-205ENST00000587774 EIF1P41567 113 aaKnown RBP16.77■□□□□ 0.28
TRIM47-205ENST00000587774 P2RX1P51575 399 aa16.77■□□□□ 0.28
TRIM47-205ENST00000587774 HBA1P69905 142 aa16.77■□□□□ 0.28
TRIM47-205ENST00000587774 ZNF239Q16600 458 aaKnown RBP16.77■□□□□ 0.28
TRIM47-205ENST00000587774 BIVMQ86UB2 503 aa16.77■□□□□ 0.28
TRIM47-205ENST00000587774 NATD1Q8N6N6 113 aa16.77■□□□□ 0.28
TRIM47-205ENST00000587774 RNF128Q8TEB7 428 aa16.77■□□□□ 0.28
TRIM47-205ENST00000587774 PIGTQ969N2 578 aa16.77■□□□□ 0.28
TRIM47-205ENST00000587774 MOAP1Q96BY2 351 aa16.77■□□□□ 0.28
TRIM47-205ENST00000587774 PKNOX2Q96KN3 472 aa16.77■□□□□ 0.28
TRIM47-205ENST00000587774 OR7D2Q96RA2 312 aa16.77■□□□□ 0.28
TRIM47-205ENST00000587774 PRPF18Q99633 342 aaKnown RBP16.77■□□□□ 0.28
TRIM47-205ENST00000587774 DUSP26Q9BV47 211 aa16.77■□□□□ 0.28
TRIM47-205ENST00000587774 SRXN1Q9BYN0 137 aa16.77■□□□□ 0.28
TRIM47-205ENST00000587774 BHLHE41Q9C0J9 482 aaPredicted RBP16.77■□□□□ 0.28
TRIM47-205ENST00000587774 HOXD1Q9GZZ0 328 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms