RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 KIAA0513O60268 411 aa13.38□□□□□ -0.27
ATG4D-207ENST00000587256 FCMRO60667 390 aa13.38□□□□□ -0.27
ATG4D-207ENST00000587256 CYP7B1O75881 506 aa13.38□□□□□ -0.27
ATG4D-207ENST00000587256 KRT75O95678 551 aa13.38□□□□□ -0.27
ATG4D-207ENST00000587256 ME2P23368 584 aa13.38□□□□□ -0.27
ATG4D-207ENST00000587256 CEACAM8P31997 349 aaPredicted RBP13.38□□□□□ -0.27
ATG4D-207ENST00000587256 SUMO3P55854 103 aaPredicted RBP13.38□□□□□ -0.27
ATG4D-207ENST00000587256 EEFSECP57772 596 aaKnown RBP13.38□□□□□ -0.27
ATG4D-207ENST00000587256 TXNL4AP83876 142 aaKnown RBP13.38□□□□□ -0.27
ATG4D-207ENST00000587256 FUT5Q11128 374 aa13.38□□□□□ -0.27
ATG4D-207ENST00000587256 PLXDC2Q6UX71 529 aa13.38□□□□□ -0.27
ATG4D-207ENST00000587256 P4HA3Q7Z4N8 544 aa13.38□□□□□ -0.27
ATG4D-207ENST00000587256 LIX1LQ8IVB5 337 aa13.38□□□□□ -0.27
ATG4D-207ENST00000587256 MCEMP1Q8IX19 187 aa13.38□□□□□ -0.27
ATG4D-207ENST00000587256 GTPBP8Q8N3Z3 284 aaPredicted RBP13.38□□□□□ -0.27
ATG4D-207ENST00000587256 ARFGAP2Q8N6H7 521 aa13.38□□□□□ -0.27
ATG4D-207ENST00000587256 RNF145Q96MT1 663 aa13.38□□□□□ -0.27
ATG4D-207ENST00000587256 NPHS2Q9NP85 383 aa13.38□□□□□ -0.27
ATG4D-207ENST00000587256 NPDC1Q9NQX5 325 aaPredicted RBP13.38□□□□□ -0.27
ATG4D-207ENST00000587256 POLE3Q9NRF9 147 aa13.38□□□□□ -0.27
ATG4D-207ENST00000587256 CLCF1Q9UBD9 225 aa13.38□□□□□ -0.27
ATG4D-207ENST00000587256 STOML1Q9UBI4 398 aa13.38□□□□□ -0.27
ATG4D-207ENST00000587256 AP4B1Q9Y6B7 739 aa13.38□□□□□ -0.27
ATG4D-207ENST00000587256 CENPVL1A0A0U1RR11 272 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 C7orf72A4D263 438 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 SLC22A20A6NK97 555 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 EEF1E1-BLOC1S5C9J1V9 151 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 H0YC42 278 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 HMGN4O00479 90 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 ZNF264O43296 627 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 EEF1E1O43324 174 aaKnown RBP13.37□□□□□ -0.27
ATG4D-207ENST00000587256 EDF1O60869 148 aaKnown RBP13.37□□□□□ -0.27
ATG4D-207ENST00000587256 C1QCP02747 245 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 TMIGD3P0DMS9 266 aaPredicted RBP13.37□□□□□ -0.27
ATG4D-207ENST00000587256 MRPL19P49406 292 aaKnown RBP13.37□□□□□ -0.27
ATG4D-207ENST00000587256 P2RX1P51575 399 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 ZNF136P52737 540 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 TPD52P55327 224 aaPredicted RBP13.37□□□□□ -0.27
ATG4D-207ENST00000587256 CLDN20P56880 219 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 RPS3AP61247 264 aaKnown RBP13.37□□□□□ -0.27
ATG4D-207ENST00000587256 TFF3Q07654 80 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 FOXF1Q12946 379 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 SQLEQ14534 574 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 ZNF141Q15928 474 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 TMEM44Q2T9K0 475 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 GTDC1Q4AE62 458 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 TYW3Q6IPR3 259 aaKnown RBP13.37□□□□□ -0.27
ATG4D-207ENST00000587256 PPP4R4Q6NUP7 873 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 SLC2A7Q6PXP3 512 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 CBLN3Q6UW01 205 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 GDF7Q7Z4P5 450 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 ADGRE4PQ86SQ3 457 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 GCNT2Q8N0V5 402 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 ZNF619Q8N2I2 560 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 RELL2Q8NC24 303 aaPredicted RBP13.37□□□□□ -0.27
ATG4D-207ENST00000587256 TOR1AIP2Q8NFQ8 470 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 WNT2BQ93097 391 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 LRRC46Q96FV0 321 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 ZFP3Q96NJ6 502 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 PINK1Q9BXM7 581 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 TMEM185BQ9H7F4 350 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 SLC6A13Q9NSD5 602 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 CCDC167Q9P0B6 97 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 DCTN4Q9UJW0 460 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 ICAM5Q9UMF0 924 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 LIPT1Q9Y234 373 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 KIAA1549Q9HCM3 1950 aa13.37□□□□□ -0.27
ATG4D-207ENST00000587256 PKDREJQ9NTG1 2253 aa13.36□□□□□ -0.27
ATG4D-207ENST00000587256 EIF1AYO14602 144 aaKnown RBP13.36□□□□□ -0.27
ATG4D-207ENST00000587256 EIF4E2O60573 245 aaKnown RBP13.36□□□□□ -0.27
ATG4D-207ENST00000587256 UGT2B17O75795 530 aa13.36□□□□□ -0.27
ATG4D-207ENST00000587256 H6PDO95479 791 aa13.36□□□□□ -0.27
ATG4D-207ENST00000587256 CSTAP01040 98 aa13.36□□□□□ -0.27
ATG4D-207ENST00000587256 ZCCHC18P0CG32 403 aa13.36□□□□□ -0.27
ATG4D-207ENST00000587256 CTSSP25774 331 aa13.36□□□□□ -0.27
ATG4D-207ENST00000587256 OPRM1P35372 400 aa13.36□□□□□ -0.27
ATG4D-207ENST00000587256 EIF1P41567 113 aaKnown RBP13.36□□□□□ -0.27
ATG4D-207ENST00000587256 CRATP43155 626 aa13.36□□□□□ -0.27
ATG4D-207ENST00000587256 ASCL1P50553 236 aa13.36□□□□□ -0.27
ATG4D-207ENST00000587256 AGFG1P52594 562 aaKnown RBP13.36□□□□□ -0.27
ATG4D-207ENST00000587256 SUCLG1P53597 346 aaKnown RBP13.36□□□□□ -0.27
ATG4D-207ENST00000587256 IRX1P78414 480 aaPredicted RBP13.36□□□□□ -0.27
ATG4D-207ENST00000587256 COX20Q5RI15 118 aa13.36□□□□□ -0.27
ATG4D-207ENST00000587256 FRRS1Q6ZNA5 592 aa13.36□□□□□ -0.27
ATG4D-207ENST00000587256 EIF3MQ7L2H7 374 aaKnown RBP13.36□□□□□ -0.27
ATG4D-207ENST00000587256 ANKFN1Q8N957 763 aa13.36□□□□□ -0.27
ATG4D-207ENST00000587256 ZFP90Q8TF47 636 aa13.36□□□□□ -0.27
ATG4D-207ENST00000587256 OIT3Q8WWZ8 545 aa13.36□□□□□ -0.27
ATG4D-207ENST00000587256 INTS12Q96CB8 462 aaKnown RBP13.36□□□□□ -0.27
ATG4D-207ENST00000587256 AURKBQ96GD4 344 aaPredicted RBP13.36□□□□□ -0.27
ATG4D-207ENST00000587256 TRNT1Q96Q11 434 aaKnown RBP13.36□□□□□ -0.27
ATG4D-207ENST00000587256 UCN2Q96RP3 112 aa13.36□□□□□ -0.27
ATG4D-207ENST00000587256 SPOCK3Q9BQ16 436 aa13.36□□□□□ -0.27
ATG4D-207ENST00000587256 KLHDC3Q9BQ90 382 aa13.36□□□□□ -0.27
ATG4D-207ENST00000587256 SIKE1Q9BRV8 207 aa13.36□□□□□ -0.27
ATG4D-207ENST00000587256 ZNF629Q9UEG4 869 aaPredicted RBP13.36□□□□□ -0.27
ATG4D-207ENST00000587256 KCNE5Q9UJ90 142 aa13.36□□□□□ -0.27
ATG4D-207ENST00000587256 L3MBTL1Q9Y468 752 aa13.36□□□□□ -0.27
ATG4D-207ENST00000587256 CRYBG3Q68DQ2 2970 aa13.36□□□□□ -0.27
ATG4D-207ENST00000587256 A0A0G2JND7 137 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms