RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 CLDN15P56746 228 aa18.28■□□□□ 0.52
VAT1-203ENST00000587062 GPR68Q15743 365 aa18.28■□□□□ 0.52
VAT1-203ENST00000587062 GTF2IRD2BQ6EKJ0 949 aa18.28■□□□□ 0.52
VAT1-203ENST00000587062 ZNF621Q6ZSS3 439 aa18.28■□□□□ 0.52
VAT1-203ENST00000587062 GTF2IRD2Q86UP8 949 aa18.28■□□□□ 0.52
VAT1-203ENST00000587062 NEURL3Q96EH8 262 aa18.28■□□□□ 0.52
VAT1-203ENST00000587062 C7orf26Q96N11 449 aa18.28■□□□□ 0.52
VAT1-203ENST00000587062 TIGARQ9NQ88 270 aa18.28■□□□□ 0.52
VAT1-203ENST00000587062 ZIM2Q9NZV7 527 aa18.28■□□□□ 0.52
VAT1-203ENST00000587062 PACSIN3Q9UKS6 424 aa18.28■□□□□ 0.52
VAT1-203ENST00000587062 MCTS1Q9ULC4 181 aaKnown RBP18.28■□□□□ 0.52
VAT1-203ENST00000587062 GPC6Q9Y625 555 aaPredicted RBP18.28■□□□□ 0.52
VAT1-203ENST00000587062 NOTCH2Q04721 2471 aa18.28■□□□□ 0.52
VAT1-203ENST00000587062 CCDC154A6NI56 674 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 EIF1AYO14602 144 aaKnown RBP18.27■□□□□ 0.52
VAT1-203ENST00000587062 SYNGR4O95473 234 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 ANP32DO95626 131 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 KRT75O95678 551 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 GUSBP08236 651 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 OR12D1P0DN82 309 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 UBL4AP11441 157 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 STX1BP61266 288 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 RPS26P62854 115 aaKnown RBP18.27■□□□□ 0.52
VAT1-203ENST00000587062 SORDQ00796 357 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 CD226Q15762 336 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 TMEM44Q2T9K0 475 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 PLPPR5Q32ZL2 321 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 SAXO2Q658L1 398 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 PPP4R4Q6NUP7 873 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 POMZP3Q6PJE2 187 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 TMEM200AQ86VY9 491 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 TMCO5AQ8N6Q1 288 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 METTL25Q8N6Q8 603 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 REXO5Q96IC2 774 aaKnown RBP18.27■□□□□ 0.52
VAT1-203ENST00000587062 SH3GL2Q99962 352 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 RBM24Q9BX46 236 aaKnown RBP18.27■□□□□ 0.52
VAT1-203ENST00000587062 EDARQ9UNE0 448 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 LIPT1Q9Y234 373 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 CARD8Q9Y2G2 431 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 L3MBTL1Q9Y468 752 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 WDR45Q9Y484 360 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 USH1CQ9Y6N9 552 aa18.27■□□□□ 0.52
VAT1-203ENST00000587062 TUBAL3A6NHL2 446 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 RFXANKO14593 260 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 POLR3GO15318 223 aaPredicted RBP18.26■□□□□ 0.51
VAT1-203ENST00000587062 ELK4P28324 431 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 MAGEA8P43361 318 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 EIF1AXP47813 144 aaKnown RBP18.26■□□□□ 0.51
VAT1-203ENST00000587062 SUCLG1P53597 346 aaKnown RBP18.26■□□□□ 0.51
VAT1-203ENST00000587062 DLX5P56178 289 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 CLDN20P56880 219 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 PHC1P78364 1004 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 ZNF117Q03924 483 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 CBFBQ13951 182 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 PON3Q15166 354 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 ZNF141Q15928 474 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 SLC9B1Q4ZJI4 515 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 GPAT3Q53EU6 434 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 TNFAIP8L2Q6P589 184 aaPredicted RBP18.26■□□□□ 0.51
VAT1-203ENST00000587062 ESPNLQ6ZVH7 1005 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 EIF3MQ7L2H7 374 aaKnown RBP18.26■□□□□ 0.51
VAT1-203ENST00000587062 GCNT2Q8N0V5 402 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 CLEC4FQ8N1N0 589 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 MIER2Q8N344 545 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 CNEP1R1Q8N9A8 125 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 FAM222BQ8WU58 562 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 RNF145Q96MT1 663 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 FANCFQ9NPI8 374 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 INTS9Q9NV88 658 aaKnown RBP18.26■□□□□ 0.51
VAT1-203ENST00000587062 JKAMPQ9P055 326 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 DOCK7Q96N67 2140 aa18.26■□□□□ 0.51
VAT1-203ENST00000587062 NPIPA5A0A0B4J1W7 369 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 SERINC4A6NH21 518 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 NPIPA7E9PJI5 369 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 MSTNO14793 375 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 TGM6O95932 706 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 PLGP00747 810 aaPredicted RBP18.25■□□□□ 0.51
VAT1-203ENST00000587062 CSTAP01040 98 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 PABPC4LP0CB38 370 aaKnown RBP18.25■□□□□ 0.51
VAT1-203ENST00000587062 NPIPA8P0DM63 369 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 CCR4P51679 360 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 FOXF2Q12947 444 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 PDZK1Q5T2W1 519 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 HEPHL1Q6MZM0 1159 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 MSANTD1Q6ZTZ1 278 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 LUZP2Q86TE4 346 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 OR5W2Q8NH69 310 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 RFWD2Q8NHY2 731 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 TMEM234Q8WY98 164 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 PMM1Q92871 262 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 ROPN1LQ96C74 230 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 TEX37Q96LM6 180 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 ZNF350Q9GZX5 532 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 NDRG3Q9UGV2 375 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 MKLN1Q9UL63 735 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 SLC35A3Q9Y2D2 325 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 CENPEQ02224 2701 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 NBPF19A0A087WUL8 3843 aa18.25■□□□□ 0.51
VAT1-203ENST00000587062 MED12Q93074 2177 aa18.24■□□□□ 0.51
VAT1-203ENST00000587062 A0A1W2PNV4 684 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms