RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 CLIC1O00299 241 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 TSPAN2O60636 221 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 SCN2BO60939 215 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 ICOSLGO75144 302 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 DEAF1O75398 565 aaPredicted RBP11.29□□□□□ -0.6
ERCC2-207ENST00000586441 CBR3O75828 277 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 ZNF26P17031 533 aaPredicted RBP11.29□□□□□ -0.6
ERCC2-207ENST00000586441 NTSP30990 170 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 CDK9P50750 372 aaKnown RBP11.29□□□□□ -0.6
ERCC2-207ENST00000586441 PLCXD2Q0VAA5 305 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 LTB4RQ15722 352 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 TMEM154Q6P9G4 183 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 TMEM64Q6YI46 380 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 B3GNT6Q6ZMB0 384 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 ZNF621Q6ZSS3 439 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 AMIGO2Q86SJ2 522 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 PM20D2Q8IYS1 436 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 OR2L13Q8N349 312 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 TRIML2Q8N7C3 387 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 OR5M3Q8NGP4 307 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 OR1J4Q8NGS1 313 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 OR9A2Q8NGT5 310 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 RNF138Q8WVD3 245 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 FIG4Q92562 907 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 SDCCAG3Q96C92 435 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 PPCDCQ96CD2 204 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 TREX2Q9BQ50 279 aaPredicted RBP11.29□□□□□ -0.6
ERCC2-207ENST00000586441 TTYH2Q9BSA4 534 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 INPP5KQ9BT40 448 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 ENKD1Q9H0I2 346 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 SEMA6AQ9H2E6 1030 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 RAD21L1Q9H4I0 556 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 MAGIXQ9H6Y5 334 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 METTL7AQ9H8H3 244 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 COQ10BQ9H8M1 238 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 HHATLQ9HCP6 504 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 PNPLA3Q9NST1 481 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 NTMQ9P121 344 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 EXO1Q9UQ84 846 aaKnown RBP11.29□□□□□ -0.6
ERCC2-207ENST00000586441 AP4B1Q9Y6B7 739 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 ADGRG4Q8IZF6 3080 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 NCKAP5O14513 1909 aa11.29□□□□□ -0.6
ERCC2-207ENST00000586441 CREBBPQ92793 2442 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 CPSF4O95639 269 aaKnown RBP11.28□□□□□ -0.6
ERCC2-207ENST00000586441 ACTL6AO96019 429 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 GSNP06396 782 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 CELA3AP09093 270 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 LAMP1P11279 417 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 GPX2P18283 190 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 ENDOUP21128 410 aaKnown RBP11.28□□□□□ -0.6
ERCC2-207ENST00000586441 GDF1P27539 372 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 KRT20P35900 424 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 FRKP42685 505 aaPredicted RBP11.28□□□□□ -0.6
ERCC2-207ENST00000586441 MASP1P48740 699 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 GZMMP51124 257 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 NCBP2P52298 156 aaKnown RBP eCLIP11.28□□□□□ -0.6
ERCC2-207ENST00000586441 PDE7AQ13946 482 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 PDK3Q15120 406 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 GTDC1Q4AE62 458 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 VASNQ6EMK4 673 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 FAM180BQ6P0A1 224 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 C3P1Q6ZMU1 363 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 ANKRD46Q86W74 232 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 GALNT4Q8N4A0 578 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 SIMC1Q8NDZ2 872 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 OR7G2Q8NG99 324 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 GOT1L1Q8NHS2 421 aaPredicted RBP11.28□□□□□ -0.6
ERCC2-207ENST00000586441 HOXB13Q92826 284 aaPredicted RBP11.28□□□□□ -0.6
ERCC2-207ENST00000586441 KAT2AQ92830 837 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 ELP4Q96EB1 424 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 JSRP1Q96MG2 331 aaPredicted RBP11.28□□□□□ -0.6
ERCC2-207ENST00000586441 RNF145Q96MT1 663 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 AMDHD1Q96NU7 426 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 GNRHR2Q96P88 292 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 CHID1Q9BWS9 393 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 GLIPR2Q9H4G4 154 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 EXO5Q9H790 373 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 SLC24A3Q9HC58 644 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 ACSS1Q9NUB1 689 aaPredicted RBP11.28□□□□□ -0.6
ERCC2-207ENST00000586441 SH3BP4Q9P0V3 963 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 MRTO4Q9UKD2 239 aaKnown RBP11.28□□□□□ -0.6
ERCC2-207ENST00000586441 LIPGQ9Y5X9 500 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 ARHGAP21Q5T5U3 1957 aa11.28□□□□□ -0.6
ERCC2-207ENST00000586441 HCFC1P51610 2035 aa11.27□□□□□ -0.61
ERCC2-207ENST00000586441 RNF103-CHMP3A0A140T963 221 aa11.27□□□□□ -0.61
ERCC2-207ENST00000586441 UPK1AO00322 258 aa11.27□□□□□ -0.61
ERCC2-207ENST00000586441 SNPHO15079 494 aa11.27□□□□□ -0.61
ERCC2-207ENST00000586441 CLOCKO15516 846 aa11.27□□□□□ -0.61
ERCC2-207ENST00000586441 ZNHIT1O43257 154 aa11.27□□□□□ -0.61
ERCC2-207ENST00000586441 UGT2B11O75310 529 aa11.27□□□□□ -0.61
ERCC2-207ENST00000586441 REM1O75628 298 aa11.27□□□□□ -0.61
ERCC2-207ENST00000586441 SOX30O94993 753 aa11.27□□□□□ -0.61
ERCC2-207ENST00000586441 LYNP07948 512 aa11.27□□□□□ -0.61
ERCC2-207ENST00000586441 COX6B1P14854 86 aa11.27□□□□□ -0.61
ERCC2-207ENST00000586441 GRNP28799 593 aaKnown RBP11.27□□□□□ -0.61
ERCC2-207ENST00000586441 PTGDSP41222 190 aa11.27□□□□□ -0.61
ERCC2-207ENST00000586441 CDKN2CP42773 168 aa11.27□□□□□ -0.61
ERCC2-207ENST00000586441 CHN2P52757 468 aa11.27□□□□□ -0.61
ERCC2-207ENST00000586441 PSG6Q00889 435 aa11.27□□□□□ -0.61
ERCC2-207ENST00000586441 PMPCAQ10713 525 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms