RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 SWT1Q5T5J6 900 aaKnown RBP11.62□□□□□ -0.55
VMP1-202ENST00000585847 WLSQ5T9L3 541 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 HMBOX1Q6NT76 420 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 BORAQ6PGQ7 559 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 ZNF550Q7Z398 422 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 OFCC1Q8IZS5 231 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 SLC34A3Q8N130 599 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 SIRT6Q8N6T7 355 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 CLEC1AQ8NC01 280 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 PHF10Q8WUB8 498 aaKnown RBP11.62□□□□□ -0.55
VMP1-202ENST00000585847 RMND5BQ96G75 393 aaPredicted RBP11.62□□□□□ -0.55
VMP1-202ENST00000585847 YIPF4Q9BSR8 244 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 EXOSC3Q9NQT5 275 aaKnown RBP11.62□□□□□ -0.55
VMP1-202ENST00000585847 UBQLN4Q9NRR5 601 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 ABCG2Q9UNQ0 655 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 SH3GLB1Q9Y371 365 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 SAMHD1Q9Y3Z3 626 aaKnown RBP11.62□□□□□ -0.55
VMP1-202ENST00000585847 V9GYQ6 96 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 BSNQ9UPA5 3926 aa11.62□□□□□ -0.55
VMP1-202ENST00000585847 CDHR4A6H8M9 788 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 NPIPB9F8W1W9 429 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 H0YAE9 185 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 AP3D1O14617 1153 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 ZFAND5O76080 213 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 OPN1SWP03999 348 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 ANXA8P13928 327 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 HPGDP15428 266 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 ITGA3P26006 1051 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 DCTP40126 519 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 CLK3P49761 638 aaKnown RBP11.61□□□□□ -0.55
VMP1-202ENST00000585847 ST13P50502 369 aaKnown RBP11.61□□□□□ -0.55
VMP1-202ENST00000585847 RGS8P57771 180 aaPredicted RBP11.61□□□□□ -0.55
VMP1-202ENST00000585847 MLF1P58340 268 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 EEF1A1P68104 462 aaKnown RBP11.61□□□□□ -0.55
VMP1-202ENST00000585847 RPP38P78345 283 aaKnown RBP11.61□□□□□ -0.55
VMP1-202ENST00000585847 DUSP7Q16829 419 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 IQCCQ4KMZ1 466 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 RPS26P11Q5JNZ5 115 aaPredicted RBP11.61□□□□□ -0.55
VMP1-202ENST00000585847 TCTN3Q6NUS6 607 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 JMJD6Q6NYC1 403 aaPredicted RBP11.61□□□□□ -0.55
VMP1-202ENST00000585847 LYPD8Q6UX82 237 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 NPSR1Q6W5P4 371 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 CARM1Q86X55 608 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 CBR4Q8N4T8 237 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 EXD3Q8N9H8 876 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 GPR32P1Q8NGA4 272 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 SLC22A8Q8TCC7 542 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 DIO2Q92813 273 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 TMBIM1Q969X1 311 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 OTUB1Q96FW1 271 aaPredicted RBP11.61□□□□□ -0.55
VMP1-202ENST00000585847 SMAD5Q99717 465 aaKnown RBP11.61□□□□□ -0.55
VMP1-202ENST00000585847 CIB1Q99828 191 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 CDCP1Q9H5V8 836 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 SMPD3Q9NY59 655 aaPredicted RBP11.61□□□□□ -0.55
VMP1-202ENST00000585847 GPR83Q9NYM4 423 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 TMCC3Q9ULS5 477 aa11.61□□□□□ -0.55
VMP1-202ENST00000585847 OR6C70A6NIJ9 312 aa11.6□□□□□ -0.55
VMP1-202ENST00000585847 FAAHO00519 579 aa11.6□□□□□ -0.55
VMP1-202ENST00000585847 SCDO00767 359 aa11.6□□□□□ -0.55
VMP1-202ENST00000585847 ALPLP05186 524 aa11.6□□□□□ -0.55
VMP1-202ENST00000585847 H1F0P07305 194 aaKnown RBP11.6□□□□□ -0.55
VMP1-202ENST00000585847 IL12BP29460 328 aa11.6□□□□□ -0.55
VMP1-202ENST00000585847 RRM2P31350 389 aa11.6□□□□□ -0.55
VMP1-202ENST00000585847 PPP2R2BQ00005 443 aa11.6□□□□□ -0.55
VMP1-202ENST00000585847 PLCXD2Q0VAA5 305 aa11.6□□□□□ -0.55
VMP1-202ENST00000585847 ST3GAL3Q11203 375 aa11.6□□□□□ -0.55
VMP1-202ENST00000585847 IL18R1Q13478 541 aa11.6□□□□□ -0.55
VMP1-202ENST00000585847 ZNF468Q5VIY5 522 aaPredicted RBP11.6□□□□□ -0.55
VMP1-202ENST00000585847 LPCAT4Q643R3 524 aa11.6□□□□□ -0.55
VMP1-202ENST00000585847 IGFL2Q6UWQ7 119 aa11.6□□□□□ -0.55
VMP1-202ENST00000585847 AMIGO2Q86SJ2 522 aa11.6□□□□□ -0.55
VMP1-202ENST00000585847 BCORP1Q8N888 145 aa11.6□□□□□ -0.55
VMP1-202ENST00000585847 SMYD1Q8NB12 490 aa11.6□□□□□ -0.55
VMP1-202ENST00000585847 THAP3Q8WTV1 239 aaPredicted RBP11.6□□□□□ -0.55
VMP1-202ENST00000585847 SECISBP2Q96T21 854 aaKnown RBP11.6□□□□□ -0.55
VMP1-202ENST00000585847 DEFB126Q9BYW3 111 aa11.6□□□□□ -0.55
VMP1-202ENST00000585847 TRIM2Q9C040 744 aa11.6□□□□□ -0.55
VMP1-202ENST00000585847 SEMA6AQ9H2E6 1030 aa11.6□□□□□ -0.55
VMP1-202ENST00000585847 NTN4Q9HB63 628 aa11.6□□□□□ -0.55
VMP1-202ENST00000585847 PCDHGA9Q9Y5G4 932 aaKnown RBP11.6□□□□□ -0.55
VMP1-202ENST00000585847 CYSRT1A8MQ03 144 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 hCG_2039718K7EN88 272 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 TNFRSF11BO00300 401 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 DENRO43583 198 aaKnown RBP11.59□□□□□ -0.55
VMP1-202ENST00000585847 FCMRO60667 390 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 GADD45GO95257 159 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 ADAP00813 363 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 TBXA2RP21731 343 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 SLC6A8P48029 635 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 LIMS1P48059 325 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 SPIBQ01892 262 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 MED21Q13503 144 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 FGFBP1Q14512 234 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 TAF11Q15544 211 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 GPR68Q15743 365 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 TTC23Q5W5X9 447 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 ZNF613Q6PF04 617 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 WDR53Q7Z5U6 358 aaPredicted RBP11.59□□□□□ -0.55
VMP1-202ENST00000585847 STK32CQ86UX6 486 aa11.59□□□□□ -0.55
VMP1-202ENST00000585847 RPS19BP1Q86WX3 136 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms