RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 CNIH4Q9P003 139 aa14.96□□□□□ -0.01
CDK5RAP3-228ENST00000583363 LRFN1Q9P244 771 aa14.96□□□□□ -0.01
CDK5RAP3-228ENST00000583363 SLC13A4Q9UKG4 626 aa14.96□□□□□ -0.01
CDK5RAP3-228ENST00000583363 SLC35A3Q9Y2D2 325 aa14.96□□□□□ -0.01
CDK5RAP3-228ENST00000583363 SH3GLB1Q9Y371 365 aa14.96□□□□□ -0.01
CDK5RAP3-228ENST00000583363 EXPH5Q8NEV8 1989 aa14.96□□□□□ -0.01
CDK5RAP3-228ENST00000583363 ANKRD33BA6NCL7 494 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 H0YHG0 523 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 H3BNH8 94 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 NDUFB5O43674 189 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 NEURL1O76050 574 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 ANGPTL1O95841 491 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 F10P00742 488 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 CCL3P10147 92 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 TNFRSF1BP20333 461 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 PSMA4P25789 261 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 CASRP41180 1078 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 OR1E2P47887 323 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 PLAURQ03405 335 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 CD226Q15762 336 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 TBR1Q16650 682 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 NRF1Q16656 503 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 BICRALQ6AI39 1079 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 SPINK14Q6IE38 97 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 SLC30A6Q6NXT4 461 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 BORAQ6PGQ7 559 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 MDGA2Q7Z553 956 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 OR4D11Q8NGI4 311 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 PHOSPHO1Q8TCT1 267 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 GEMIN6Q8WXD5 167 aaKnown RBP14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 EXTL1Q92935 676 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 SLC35B4Q969S0 331 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 C7orf34Q96L11 122 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 CHID1Q9BWS9 393 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 ANGPTL4Q9BY76 406 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 LAT2Q9GZY6 243 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 METTL7AQ9H8H3 244 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 EVA1AQ9H8M9 152 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 PROK2Q9HC23 129 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 IL1RAPQ9NPH3 570 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 KLHL28Q9NXS3 571 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 AURKCQ9UQB9 309 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 COL12A1Q99715 3063 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 CPAMD8Q8IZJ3 1885 aa14.95□□□□□ -0.02
CDK5RAP3-228ENST00000583363 OR5H15A6NDH6 313 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 GTPBP1O00178 669 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 SCO2O43819 266 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 FKBP6O75344 327 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 CSTAP01040 98 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 RAP2AP10114 183 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 HOXB6P17509 224 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 C17orf67Q0P5P2 114 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 OR1C1Q15619 314 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 IQCCQ4KMZ1 466 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 ZFP1Q6P2D0 407 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 AAGABQ6PD74 315 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 TSEN54Q7Z6J9 526 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 CARM1Q86X55 608 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 RBM45Q8IUH3 476 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 LACC1Q8IV20 430 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 MISPQ8IVT2 679 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 GATSQ8NAP1 163 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 FAM71CQ8NEG0 241 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 DUSP19Q8WTR2 217 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 PYDC1Q8WXC3 89 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 FRMD6Q96NE9 622 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 SIGLEC12Q96PQ1 595 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 AMBRA1Q9C0C7 1298 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 S100A14Q9HCY8 104 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 TIMMDC1Q9NPL8 285 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 SDHAF3Q9NRP4 125 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 ARMC1Q9NVT9 282 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 DNAJB12Q9NXW2 375 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 KLRF1Q9NZS2 232 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 SLC9A8Q9Y2E8 581 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 AP4S1Q9Y587 144 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 PCDHGA9Q9Y5G4 932 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 CNTRLQ7Z7A1 2325 aa14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 UBR5O95071 2799 aaPredicted RBP14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 TLN1Q9Y490 2541 aaKnown RBP14.94□□□□□ -0.02
CDK5RAP3-228ENST00000583363 PTPN13Q12923 2485 aa14.93□□□□□ -0.02
CDK5RAP3-228ENST00000583363 C2orf72A6NCS6 295 aa14.93□□□□□ -0.02
CDK5RAP3-228ENST00000583363 M0R3H8 397 aa14.93□□□□□ -0.02
CDK5RAP3-228ENST00000583363 ZNF264O43296 627 aa14.93□□□□□ -0.02
CDK5RAP3-228ENST00000583363 OIP5O43482 229 aa14.93□□□□□ -0.02
CDK5RAP3-228ENST00000583363 EIF4E2O60573 245 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP3-228ENST00000583363 P04436 131 aa14.93□□□□□ -0.02
CDK5RAP3-228ENST00000583363 UBL4AP11441 157 aa14.93□□□□□ -0.02
CDK5RAP3-228ENST00000583363 CNR1P21554 472 aa14.93□□□□□ -0.02
CDK5RAP3-228ENST00000583363 MAGEA2P43356 314 aa14.93□□□□□ -0.02
CDK5RAP3-228ENST00000583363 TBCELQ5QJ74 424 aa14.93□□□□□ -0.02
CDK5RAP3-228ENST00000583363 ZNF550Q7Z398 422 aa14.93□□□□□ -0.02
CDK5RAP3-228ENST00000583363 PIWIL3Q7Z3Z3 882 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP3-228ENST00000583363 MDS2Q8NDY4 140 aa14.93□□□□□ -0.02
CDK5RAP3-228ENST00000583363 OR6T1Q8NGN1 323 aa14.93□□□□□ -0.02
CDK5RAP3-228ENST00000583363 OSBPL11Q9BXB4 747 aa14.93□□□□□ -0.02
CDK5RAP3-228ENST00000583363 GALNT9Q9HCQ5 603 aa14.93□□□□□ -0.02
CDK5RAP3-228ENST00000583363 EXOSC3Q9NQT5 275 aaKnown RBP14.93□□□□□ -0.02
CDK5RAP3-228ENST00000583363 SACM1LQ9NTJ5 587 aa14.93□□□□□ -0.02
CDK5RAP3-228ENST00000583363 CARD8Q9Y2G2 431 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms