RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 UGT2B28Q9BY64 529 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 OLAHQ9NV23 265 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 FLRT3Q9NZU0 649 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 KCNE5Q9UJ90 142 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 POMPQ9Y244 141 aa13.05□□□□□ -0.32
SKA2-205ENST00000580541 TNRC6AQ8NDV7 1962 aaKnown RBP13.04□□□□□ -0.32
SKA2-205ENST00000580541 ERICH4A6NGS2 130 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 AQP12BA6NM10 295 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 TRIM3O75382 744 aaPredicted RBP13.04□□□□□ -0.32
SKA2-205ENST00000580541 GCM2O75603 506 aaPredicted RBP13.04□□□□□ -0.32
SKA2-205ENST00000580541 CYP7B1O75881 506 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 NUDT14O95848 222 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 LGI1O95970 557 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 PDGFAP04085 211 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 FESP07332 822 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 LINGO3P0C6S8 592 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 UBTFL6P0CB48 400 aaPredicted RBP13.04□□□□□ -0.32
SKA2-205ENST00000580541 UMPSP11172 480 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 PGCP20142 388 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 PTGDSP41222 190 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 MEOX1P50221 254 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 DMTNQ08495 405 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 DUSP7Q16829 419 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 FNDC7Q5VTL7 733 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 C1orf146Q5VVC0 180 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 ZNF771Q7L3S4 317 aaPredicted RBP13.04□□□□□ -0.32
SKA2-205ENST00000580541 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.04□□□□□ -0.32
SKA2-205ENST00000580541 RANBP3LQ86VV4 465 aaPredicted RBP13.04□□□□□ -0.32
SKA2-205ENST00000580541 SPPL2CQ8IUH8 684 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 AQP12AQ8IXF9 295 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 TMCO5AQ8N6Q1 288 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 GATSQ8NAP1 163 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 SMYD1Q8NB12 490 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 OR5W2Q8NH69 310 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 TMEM234Q8WY98 164 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 TAMM41Q96BW9 452 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 MFRPQ9BY79 579 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 GALNT9Q9HCQ5 603 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 QPCTLQ9NXS2 382 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 SLC7A8Q9UHI5 535 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 CARD8Q9Y2G2 431 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 MRPS18CQ9Y3D5 142 aaKnown RBP13.04□□□□□ -0.32
SKA2-205ENST00000580541 CFAP47Q6ZTR5 3102 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 LOC400499M0QZD8 3231 aa13.04□□□□□ -0.32
SKA2-205ENST00000580541 A0A087WZY1 265 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 ACOT8O14734 319 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 OPN1SWP03999 348 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 NQO1P15559 274 aaKnown RBP13.03□□□□□ -0.32
SKA2-205ENST00000580541 ITGA2P17301 1181 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 GCKP35557 465 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 DNASE1L1P49184 302 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 ZNF41P51814 821 aaPredicted RBP13.03□□□□□ -0.32
SKA2-205ENST00000580541 DSCR4P56555 118 aaPredicted RBP13.03□□□□□ -0.32
SKA2-205ENST00000580541 GPR85P60893 370 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 MS4A2Q01362 244 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 KCNC4Q03721 635 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 HYAL4Q2M3T9 481 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 PLEKHN1Q494U1 663 aaPredicted RBP13.03□□□□□ -0.32
SKA2-205ENST00000580541 IFI44LQ53G44 452 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 BICRALQ6AI39 1079 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 CYP2R1Q6VVX0 501 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 ZNF836Q6ZNA1 936 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 EXD3Q8N9H8 876 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 ZFP62Q8NB50 900 aaPredicted RBP13.03□□□□□ -0.32
SKA2-205ENST00000580541 GEMIN6Q8WXD5 167 aaKnown RBP13.03□□□□□ -0.32
SKA2-205ENST00000580541 NTNG2Q96CW9 530 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 PYURFQ96I23 114 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 DSN1Q9H410 356 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 YY1AP1Q9H869 796 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 PROK2Q9HC23 129 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 GMPR2Q9P2T1 348 aaKnown RBP13.03□□□□□ -0.32
SKA2-205ENST00000580541 STOML1Q9UBI4 398 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 SH3GLB1Q9Y371 365 aa13.03□□□□□ -0.32
SKA2-205ENST00000580541 LAMA5O15230 3695 aa13.02□□□□□ -0.32
SKA2-205ENST00000580541 MGAQ8IWI9 3026 aa13.02□□□□□ -0.32
SKA2-205ENST00000580541 C2orf72A6NCS6 295 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 ANKUB1A6NFN9 424 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 G3V3Y1 287 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 K7EM74 188 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 AP3D1O14617 1153 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 GNB5O14775 395 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 EIF1P41567 113 aaKnown RBP13.02□□□□□ -0.33
SKA2-205ENST00000580541 CD97P48960 835 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 CCR4P51679 360 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 RGS8P57771 180 aaPredicted RBP13.02□□□□□ -0.33
SKA2-205ENST00000580541 PPIAP62937 165 aaKnown RBP13.02□□□□□ -0.33
SKA2-205ENST00000580541 SLC10A1Q14973 349 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 TOMM20Q15388 145 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 CD226Q15762 336 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 GLYR1Q49A26 553 aaPredicted RBP13.02□□□□□ -0.33
SKA2-205ENST00000580541 FAM98BQ52LJ0 330 aaKnown RBP13.02□□□□□ -0.33
SKA2-205ENST00000580541 SLC6A19Q695T7 634 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 OR5M10Q6IEU7 315 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 HMGN2P46Q86SG4 172 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 SPATA24Q86W54 205 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 CLIP4Q8N3C7 705 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 FADS6Q8N9I5 356 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 WDSUB1Q8N9V3 476 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 FAM71CQ8NEG0 241 aa13.02□□□□□ -0.33
SKA2-205ENST00000580541 OR2M3Q8NG83 312 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms