RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 IL12AP29459 219 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 SSTR2P30874 369 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 CEACAM8P31997 349 aaPredicted RBP9.84□□□□□ -0.83
NDEL1-208ENST00000580237 OPRM1P35372 400 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 P2RX1P51575 399 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 AGFG1P52594 562 aaKnown RBP9.84□□□□□ -0.83
NDEL1-208ENST00000580237 AQP5P55064 265 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 SUMO3P55854 103 aaPredicted RBP9.84□□□□□ -0.83
NDEL1-208ENST00000580237 TFF3Q07654 80 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 FOXF1Q12946 379 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 BCL2A1Q16548 175 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 PLPPR5Q32ZL2 321 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 NDUFAF6Q330K2 333 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 OR2A2Q6IF42 318 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 EPGNQ6UW88 154 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 PLXDC2Q6UX71 529 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 CHDHQ8NE62 594 aaPredicted RBP9.84□□□□□ -0.83
NDEL1-208ENST00000580237 TOR1AIP2Q8NFQ8 470 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 OR9I1Q8NGQ6 314 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 MIPOL1Q8TD10 442 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 ROPN1LQ96C74 230 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 INTS12Q96CB8 462 aaKnown RBP9.84□□□□□ -0.83
NDEL1-208ENST00000580237 RNF145Q96MT1 663 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 SDF2Q99470 211 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 ZNF559Q9BR84 538 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 SFXN3Q9BWM7 321 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 PRRG4Q9BZD6 226 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 TRIM8Q9BZR9 551 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 NMUR2Q9GZQ4 415 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 ZNF350Q9GZX5 532 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 ENKD1Q9H0I2 346 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 TMEM185BQ9H7F4 350 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 SDR39U1Q9NRG7 319 aaPredicted RBP9.84□□□□□ -0.83
NDEL1-208ENST00000580237 ZNF629Q9UEG4 869 aaPredicted RBP9.84□□□□□ -0.83
NDEL1-208ENST00000580237 MKLN1Q9UL63 735 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 CARD8Q9Y2G2 431 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 ZNF337Q9Y3M9 751 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 DTNAQ9Y4J8 743 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 AP4B1Q9Y6B7 739 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 ABCA12Q86UK0 2595 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 MPDZO75970 2070 aa9.84□□□□□ -0.83
NDEL1-208ENST00000580237 SERINC4A6NH21 518 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 NR5A2O00482 541 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 ZNF264O43296 627 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 KIAA0513O60268 411 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 TGDSO95455 350 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 CSTAP01040 98 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 PRF1P14222 555 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 CPOXP36551 454 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 EIF1P41567 113 aaKnown RBP9.83□□□□□ -0.84
NDEL1-208ENST00000580237 CDKN2CP42773 168 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 EIF1AXP47813 144 aaKnown RBP9.83□□□□□ -0.84
NDEL1-208ENST00000580237 POLR2JP52435 117 aaKnown RBP9.83□□□□□ -0.84
NDEL1-208ENST00000580237 CLDN20P56880 219 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 TXNL4AP83876 142 aaKnown RBP9.83□□□□□ -0.84
NDEL1-208ENST00000580237 TLE4Q04727 773 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 CBFBQ13951 182 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 PON3Q15166 354 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 ARHGAP11BQ3KRB8 267 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 KLHL26Q53HC5 615 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 HSP90B2PQ58FF3 399 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.83□□□□□ -0.84
NDEL1-208ENST00000580237 MSANTD1Q6ZTZ1 278 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 OLIG3Q7RTU3 272 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 TMEM200AQ86VY9 491 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 ZNF619Q8N2I2 560 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 GTPBP8Q8N3Z3 284 aaPredicted RBP9.83□□□□□ -0.84
NDEL1-208ENST00000580237 CNEP1R1Q8N9A8 125 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 RNASE6Q93091 150 aaKnown RBP9.83□□□□□ -0.84
NDEL1-208ENST00000580237 ITCHQ96J02 903 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 MAGEB18Q96M61 343 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 EBF4Q9BQW3 602 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 CACYBPQ9HB71 228 aaKnown RBP9.83□□□□□ -0.84
NDEL1-208ENST00000580237 POLE3Q9NRF9 147 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 CRYBG3Q68DQ2 2970 aa9.83□□□□□ -0.84
NDEL1-208ENST00000580237 CREBBPQ92793 2442 aa9.82□□□□□ -0.84
NDEL1-208ENST00000580237 FAM234BA2RU67 622 aa9.82□□□□□ -0.84
NDEL1-208ENST00000580237 C7orf72A4D263 438 aa9.82□□□□□ -0.84
NDEL1-208ENST00000580237 TMEM247A6NEH6 219 aa9.82□□□□□ -0.84
NDEL1-208ENST00000580237 GJE1A6NN92 205 aa9.82□□□□□ -0.84
NDEL1-208ENST00000580237 H0YC42 278 aa9.82□□□□□ -0.84
NDEL1-208ENST00000580237 ZNF195O14628 629 aa9.82□□□□□ -0.84
NDEL1-208ENST00000580237 OIP5O43482 229 aa9.82□□□□□ -0.84
NDEL1-208ENST00000580237 EIF4E2O60573 245 aaKnown RBP9.82□□□□□ -0.84
NDEL1-208ENST00000580237 FCMRO60667 390 aa9.82□□□□□ -0.84
NDEL1-208ENST00000580237 SMNDC1O75940 238 aaKnown RBP eCLIP9.82□□□□□ -0.84
NDEL1-208ENST00000580237 SASH3O75995 380 aa9.82□□□□□ -0.84
NDEL1-208ENST00000580237 SYNGR4O95473 234 aa9.82□□□□□ -0.84
NDEL1-208ENST00000580237 IL18BPO95998 194 aa9.82□□□□□ -0.84
NDEL1-208ENST00000580237 PLGP00747 810 aaPredicted RBP9.82□□□□□ -0.84
NDEL1-208ENST00000580237 UBTFL6P0CB48 400 aaPredicted RBP9.82□□□□□ -0.84
NDEL1-208ENST00000580237 NR2F1P10589 423 aa9.82□□□□□ -0.84
NDEL1-208ENST00000580237 ELK4P28324 431 aa9.82□□□□□ -0.84
NDEL1-208ENST00000580237 SFTPDP35247 375 aa9.82□□□□□ -0.84
NDEL1-208ENST00000580237 PEX19P40855 299 aa9.82□□□□□ -0.84
NDEL1-208ENST00000580237 CRATP43155 626 aa9.82□□□□□ -0.84
NDEL1-208ENST00000580237 IDH3AP50213 366 aa9.82□□□□□ -0.84
NDEL1-208ENST00000580237 SUCLG1P53597 346 aaKnown RBP9.82□□□□□ -0.84
NDEL1-208ENST00000580237 TPD52P55327 224 aaPredicted RBP9.82□□□□□ -0.84
NDEL1-208ENST00000580237 CLDN15P56746 228 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms