RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 NIPSNAP1Q9BPW8 284 aa18.74■□□□□ 0.59
SMG8-203ENST00000578922 OR8D2Q9GZM6 311 aa18.74■□□□□ 0.59
SMG8-203ENST00000578922 VN1R1Q9GZP7 353 aa18.74■□□□□ 0.59
SMG8-203ENST00000578922 ZNF350Q9GZX5 532 aa18.74■□□□□ 0.59
SMG8-203ENST00000578922 CFAP54Q96N23 3096 aa18.74■□□□□ 0.59
SMG8-203ENST00000578922 NKX2-2O95096 273 aa18.74■□□□□ 0.59
SMG8-203ENST00000578922 IFI6P09912 130 aa18.74■□□□□ 0.59
SMG8-203ENST00000578922 S100A5P33763 92 aa18.74■□□□□ 0.59
SMG8-203ENST00000578922 LIMK1P53667 647 aa18.74■□□□□ 0.59
SMG8-203ENST00000578922 ST3GAL4Q11206 333 aa18.74■□□□□ 0.59
SMG8-203ENST00000578922 MAPK14Q16539 360 aa18.74■□□□□ 0.59
SMG8-203ENST00000578922 LYSMD2Q8IV50 215 aa18.74■□□□□ 0.59
SMG8-203ENST00000578922 PEX5LQ8IYB4 626 aa18.74■□□□□ 0.59
SMG8-203ENST00000578922 SENP5Q96HI0 755 aaPredicted RBP18.74■□□□□ 0.59
SMG8-203ENST00000578922 CDCA4Q9BXL8 241 aa18.74■□□□□ 0.59
SMG8-203ENST00000578922 NMNAT1Q9HAN9 279 aaPredicted RBP18.74■□□□□ 0.59
SMG8-203ENST00000578922 GPR83Q9NYM4 423 aa18.74■□□□□ 0.59
SMG8-203ENST00000578922 ZNF443Q9Y2A4 671 aaPredicted RBP18.74■□□□□ 0.59
SMG8-203ENST00000578922 IGKV3D-11A0A0A0MRZ8 115 aa18.73■□□□□ 0.59
SMG8-203ENST00000578922 CCNB2O95067 398 aa18.73■□□□□ 0.59
SMG8-203ENST00000578922 KCNK2O95069 426 aa18.73■□□□□ 0.59
SMG8-203ENST00000578922 STSP08842 583 aa18.73■□□□□ 0.59
SMG8-203ENST00000578922 ZNF883P0CG24 379 aa18.73■□□□□ 0.59
SMG8-203ENST00000578922 TGFBR1P36897 503 aa18.73■□□□□ 0.59
SMG8-203ENST00000578922 GSSP48637 474 aa18.73■□□□□ 0.59
SMG8-203ENST00000578922 RGS6P49758 472 aa18.73■□□□□ 0.59
SMG8-203ENST00000578922 FUT7Q11130 342 aa18.73■□□□□ 0.59
SMG8-203ENST00000578922 KRR1Q13601 381 aaKnown RBP18.73■□□□□ 0.59
SMG8-203ENST00000578922 TIMM50Q3ZCQ8 353 aa18.73■□□□□ 0.59
SMG8-203ENST00000578922 ARMCX4Q5H9R4 360 aa18.73■□□□□ 0.59
SMG8-203ENST00000578922 NPSR1Q6W5P4 371 aa18.73■□□□□ 0.59
SMG8-203ENST00000578922 CACYBPQ9HB71 228 aaKnown RBP18.73■□□□□ 0.59
SMG8-203ENST00000578922 MKKSQ9NPJ1 570 aaPredicted RBP18.73■□□□□ 0.59
SMG8-203ENST00000578922 SATB2Q9UPW6 733 aa18.73■□□□□ 0.59
SMG8-203ENST00000578922 CLCA3PQ9Y6N3 262 aa18.73■□□□□ 0.59
SMG8-203ENST00000578922 TRBV4-1A0A0J9YWV2 114 aa18.72■□□□□ 0.59
SMG8-203ENST00000578922 FLRT2O43155 660 aa18.72■□□□□ 0.59
SMG8-203ENST00000578922 CLPSP04118 112 aa18.72■□□□□ 0.59
SMG8-203ENST00000578922 POU2F1P14859 743 aa18.72■□□□□ 0.59
SMG8-203ENST00000578922 CBLP22681 906 aa18.72■□□□□ 0.59
SMG8-203ENST00000578922 NKAIN1Q4KMZ8 207 aa18.72■□□□□ 0.59
SMG8-203ENST00000578922 ZNF836Q6ZNA1 936 aa18.72■□□□□ 0.59
SMG8-203ENST00000578922 DBX2Q6ZNG2 339 aa18.72■□□□□ 0.59
SMG8-203ENST00000578922 LANCL3Q6ZV70 420 aa18.72■□□□□ 0.59
SMG8-203ENST00000578922 LSRQ86X29 649 aaPredicted RBP18.72■□□□□ 0.59
SMG8-203ENST00000578922 ZNF619Q8N2I2 560 aa18.72■□□□□ 0.59
SMG8-203ENST00000578922 ZNF615Q8N8J6 731 aa18.72■□□□□ 0.59
SMG8-203ENST00000578922 PELOQ9BRX2 385 aaKnown RBP18.72■□□□□ 0.59
SMG8-203ENST00000578922 LMF2Q9BU23 707 aaKnown RBP18.72■□□□□ 0.59
SMG8-203ENST00000578922 AMBNQ9NP70 447 aa18.72■□□□□ 0.59
SMG8-203ENST00000578922 KCNE5Q9UJ90 142 aa18.72■□□□□ 0.59
SMG8-203ENST00000578922 ZNF229Q9UJW7 825 aa18.72■□□□□ 0.59
SMG8-203ENST00000578922 KCND3Q9UK17 655 aa18.72■□□□□ 0.59
SMG8-203ENST00000578922 PEX16Q9Y5Y5 336 aa18.72■□□□□ 0.59
SMG8-203ENST00000578922 CDX4O14627 284 aaPredicted RBP18.72■□□□□ 0.59
SMG8-203ENST00000578922 CCL4P13236 92 aa18.72■□□□□ 0.59
SMG8-203ENST00000578922 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.72■□□□□ 0.59
SMG8-203ENST00000578922 COLEC12Q5KU26 742 aa18.72■□□□□ 0.59
SMG8-203ENST00000578922 STT3BQ8TCJ2 826 aa18.72■□□□□ 0.59
SMG8-203ENST00000578922 A4GNTQ9UNA3 340 aa18.72■□□□□ 0.59
SMG8-203ENST00000578922 IGKV1D-16P01601 117 aa18.71■□□□□ 0.59
SMG8-203ENST00000578922 DBTP11182 482 aaKnown RBP18.71■□□□□ 0.59
SMG8-203ENST00000578922 ACP1P24666 158 aa18.71■□□□□ 0.59
SMG8-203ENST00000578922 PRKAR1BP31321 381 aa18.71■□□□□ 0.59
SMG8-203ENST00000578922 ZNF614Q8N883 585 aa18.71■□□□□ 0.59
SMG8-203ENST00000578922 MESP1Q9BRJ9 268 aa18.71■□□□□ 0.59
SMG8-203ENST00000578922 CDADC1Q9BWV3 514 aa18.71■□□□□ 0.59
SMG8-203ENST00000578922 C6orf62Q9GZU0 229 aaPredicted RBP18.71■□□□□ 0.59
SMG8-203ENST00000578922 TRIM45Q9H8W5 580 aaPredicted RBP18.71■□□□□ 0.59
SMG8-203ENST00000578922 ZNF232Q9UNY5 417 aa18.71■□□□□ 0.59
SMG8-203ENST00000578922 NTNG1Q9Y2I2 539 aa18.71■□□□□ 0.59
SMG8-203ENST00000578922 IFT52Q9Y366 437 aa18.71■□□□□ 0.59
SMG8-203ENST00000578922 PCDHGB2Q9Y5G2 931 aa18.71■□□□□ 0.59
SMG8-203ENST00000578922 PNMA8CA0A1B0GUJ8 204 aa18.71■□□□□ 0.59
SMG8-203ENST00000578922 TCRBV16S1A1N1A0A5B0 115 aa18.71■□□□□ 0.59
SMG8-203ENST00000578922 KIAA0513O60268 411 aa18.71■□□□□ 0.59
SMG8-203ENST00000578922 UGT2B17O75795 530 aa18.71■□□□□ 0.59
SMG8-203ENST00000578922 PTTG1O95997 202 aa18.71■□□□□ 0.59
SMG8-203ENST00000578922 H1F0P07305 194 aaKnown RBP18.71■□□□□ 0.59
SMG8-203ENST00000578922 ZFP36L1Q07352 338 aaKnown RBP18.71■□□□□ 0.59
SMG8-203ENST00000578922 LARS2Q15031 903 aaKnown RBP18.71■□□□□ 0.59
SMG8-203ENST00000578922 PTGES3Q15185 160 aaKnown RBP18.71■□□□□ 0.59
SMG8-203ENST00000578922 FLYWCH1Q4VC44 716 aa18.71■□□□□ 0.59
SMG8-203ENST00000578922 C19orf48Q6RUI8 117 aa18.71■□□□□ 0.59
SMG8-203ENST00000578922 HOXB13Q92826 284 aaPredicted RBP18.71■□□□□ 0.59
SMG8-203ENST00000578922 GTPBP3Q969Y2 492 aaKnown RBP18.71■□□□□ 0.59
SMG8-203ENST00000578922 ARHGDIGQ99819 225 aa18.71■□□□□ 0.59
SMG8-203ENST00000578922 ABCB10Q9NRK6 738 aa18.71■□□□□ 0.59
SMG8-203ENST00000578922 CLN6Q9NWW5 311 aa18.71■□□□□ 0.59
SMG8-203ENST00000578922 OR10H1Q9Y4A9 318 aa18.71■□□□□ 0.59
SMG8-203ENST00000578922 CPSF4LA6NMK7 179 aaKnown RBP18.7■□□□□ 0.58
SMG8-203ENST00000578922 ZAR1LA6NP61 321 aa18.7■□□□□ 0.58
SMG8-203ENST00000578922 POLR1CO15160 346 aaPredicted RBP18.7■□□□□ 0.58
SMG8-203ENST00000578922 BRINP1O60477 761 aa18.7■□□□□ 0.58
SMG8-203ENST00000578922 SNX4O95219 450 aa18.7■□□□□ 0.58
SMG8-203ENST00000578922 PTHP01270 115 aa18.7■□□□□ 0.58
SMG8-203ENST00000578922 ZGLP1P0C6A0 271 aa18.7■□□□□ 0.58
SMG8-203ENST00000578922 CT45A8P0DMV1 189 aa18.7■□□□□ 0.58
SMG8-203ENST00000578922 CT45A9P0DMV2 189 aa18.7■□□□□ 0.58
SMG8-203ENST00000578922 PIPP12273 146 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms