RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 ZPLD1Q8TCW7 415 aa17.62■□□□□ 0.41
SS18-209ENST00000578595 SPDL1Q96EA4 605 aa17.62■□□□□ 0.41
SS18-209ENST00000578595 AURKBQ96GD4 344 aaPredicted RBP17.62■□□□□ 0.41
SS18-209ENST00000578595 NMUR2Q9GZQ4 415 aa17.62■□□□□ 0.41
SS18-209ENST00000578595 ZNF350Q9GZX5 532 aa17.62■□□□□ 0.41
SS18-209ENST00000578595 SLC6A13Q9NSD5 602 aa17.62■□□□□ 0.41
SS18-209ENST00000578595 MED17Q9NVC6 651 aa17.62■□□□□ 0.41
SS18-209ENST00000578595 STOML1Q9UBI4 398 aa17.62■□□□□ 0.41
SS18-209ENST00000578595 SERINC4A6NH21 518 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 C19orf84I3L1E1 186 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 LINC01387J3KSC0 135 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 DVL2O14641 736 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 ZNF264O43296 627 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 OIP5O43482 229 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 KIAA0513O60268 411 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 H6PDO95479 791 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 CSTAP01040 98 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 NR2F1P10589 423 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 ME2P23368 584 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 P2RX1P51575 399 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 GUCY1A3Q02108 690 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 HEPHL1Q6MZM0 1159 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 CBLN3Q6UW01 205 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 SEM1Q6ZVN7 128 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 ANKFN1Q8N957 763 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 MARVELD3Q96A59 401 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 ZBTB8AQ96BR9 441 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 RNF145Q96MT1 663 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 SIKE1Q9BRV8 207 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 TMEM185BQ9H7F4 350 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 POLE3Q9NRF9 147 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 FGFR1OP2Q9NVK5 253 aa17.61■□□□□ 0.41
SS18-209ENST00000578595 CENPVL1A0A0U1RR11 272 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 TMEM247A6NEH6 219 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 CD8B2A6NJW9 211 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 H0YC42 278 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 EIF1AYO14602 144 aaKnown RBP17.6■□□□□ 0.41
SS18-209ENST00000578595 HNRNPRO43390 633 aaKnown RBP17.6■□□□□ 0.41
SS18-209ENST00000578595 UGT2B17O75795 530 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 OPN1LWP04000 364 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 UBTFL6P0CB48 400 aaPredicted RBP17.6■□□□□ 0.41
SS18-209ENST00000578595 ZNF17P17021 662 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 ATP4BP51164 291 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 TPD52P55327 224 aaPredicted RBP17.6■□□□□ 0.41
SS18-209ENST00000578595 EEFSECP57772 596 aaKnown RBP17.6■□□□□ 0.41
SS18-209ENST00000578595 RPS3AP61247 264 aaKnown RBP17.6■□□□□ 0.41
SS18-209ENST00000578595 TXNL4AP83876 142 aaKnown RBP17.6■□□□□ 0.41
SS18-209ENST00000578595 FUT5Q11128 374 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 FOXF1Q12946 379 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 SYPL1Q16563 259 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 SGCBQ16585 318 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 PLPPR5Q32ZL2 321 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 GLYR1Q49A26 553 aaPredicted RBP17.6■□□□□ 0.41
SS18-209ENST00000578595 TYW3Q6IPR3 259 aaKnown RBP17.6■□□□□ 0.41
SS18-209ENST00000578595 C9orf106Q8NAJ2 232 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 NAXEQ8NCW5 288 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 TOR1AIP2Q8NFQ8 470 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 ZFP90Q8TF47 636 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 TMEM120AQ9BXJ8 343 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 PINK1Q9BXM7 581 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 QRSL1Q9H0R6 528 aaKnown RBP17.6■□□□□ 0.41
SS18-209ENST00000578595 RABEP2Q9H5N1 569 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 RUBCNLQ9H714 662 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 CALHM2Q9HA72 323 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 TPT1P8Q9HAU6 139 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 P2RX2Q9UBL9 471 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 LIPT1Q9Y234 373 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 CRYBG3Q68DQ2 2970 aa17.6■□□□□ 0.41
SS18-209ENST00000578595 MBD3L4A6NDZ8 208 aaPredicted RBP17.59■□□□□ 0.41
SS18-209ENST00000578595 MBD3L3A6NE82 208 aaPredicted RBP17.59■□□□□ 0.41
SS18-209ENST00000578595 MBD3L5A6NJ08 208 aaPredicted RBP17.59■□□□□ 0.41
SS18-209ENST00000578595 CYSRT1A8MQ03 144 aa17.59■□□□□ 0.41
SS18-209ENST00000578595 NPIPB9F8W1W9 429 aa17.59■□□□□ 0.41
SS18-209ENST00000578595 TOXO94900 526 aa17.59■□□□□ 0.41
SS18-209ENST00000578595 ZCCHC18P0CG32 403 aa17.59■□□□□ 0.41
SS18-209ENST00000578595 TMIGD3P0DMS9 266 aaPredicted RBP17.59■□□□□ 0.41
SS18-209ENST00000578595 ETFAP13804 333 aa17.59■□□□□ 0.41
SS18-209ENST00000578595 TIMP3P35625 211 aa17.59■□□□□ 0.41
SS18-209ENST00000578595 MRPL19P49406 292 aaKnown RBP17.59■□□□□ 0.41
SS18-209ENST00000578595 AGFG1P52594 562 aaKnown RBP17.59■□□□□ 0.41
SS18-209ENST00000578595 SUMO3P55854 103 aaPredicted RBP17.59■□□□□ 0.41
SS18-209ENST00000578595 CLDN20P56880 219 aa17.59■□□□□ 0.41
SS18-209ENST00000578595 DSTNP60981 165 aa17.59■□□□□ 0.41
SS18-209ENST00000578595 CHRNEQ04844 493 aa17.59■□□□□ 0.41
SS18-209ENST00000578595 ZNF141Q15928 474 aa17.59■□□□□ 0.41
SS18-209ENST00000578595 BLOC1S3Q6QNY0 202 aa17.59■□□□□ 0.41
SS18-209ENST00000578595 MEX3BQ6ZN04 569 aaKnown RBP17.59■□□□□ 0.41
SS18-209ENST00000578595 FRRS1Q6ZNA5 592 aa17.59■□□□□ 0.41
SS18-209ENST00000578595 EIF3MQ7L2H7 374 aaKnown RBP17.59■□□□□ 0.41
SS18-209ENST00000578595 LIX1LQ8IVB5 337 aa17.59■□□□□ 0.41
SS18-209ENST00000578595 GCNT2Q8N0V5 402 aa17.59■□□□□ 0.41
SS18-209ENST00000578595 MBD3L2Q8NHZ7 208 aaPredicted RBP17.59■□□□□ 0.41
SS18-209ENST00000578595 GTF2H4Q92759 462 aa17.59■□□□□ 0.41
SS18-209ENST00000578595 TM9SF2Q99805 663 aa17.59■□□□□ 0.41
SS18-209ENST00000578595 KLHDC3Q9BQ90 382 aa17.59■□□□□ 0.41
SS18-209ENST00000578595 CACYBPQ9HB71 228 aaKnown RBP17.59■□□□□ 0.41
SS18-209ENST00000578595 L3MBTL1Q9Y468 752 aa17.59■□□□□ 0.41
SS18-209ENST00000578595 AP4B1Q9Y6B7 739 aa17.59■□□□□ 0.41
SS18-209ENST00000578595 MAST4O15021 2626 aa17.59■□□□□ 0.41
SS18-209ENST00000578595 NOTCH2Q04721 2471 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms