RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 PCDHB14Q9Y5E9 798 aa20.07■□□□□ 0.8
SMARCD2-206ENST00000577990 KLF2Q9Y5W3 355 aaPredicted RBP20.07■□□□□ 0.8
SMARCD2-206ENST00000577990 DCHS2Q6V1P9 2916 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 CENPVL1A0A0U1RR11 272 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 SERINC4A6NH21 518 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 LINC01387J3KSC0 135 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 GTPBP1O00178 669 aaKnown RBP20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 OIP5O43482 229 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 UGT2B17O75795 530 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 H6PDO95479 791 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 EPPINO95925 133 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 ZNF708P17019 499 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 HOXB9P17482 250 aaPredicted RBP20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 POU3F2P20265 443 aaPredicted RBP20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 CHRNB4P30926 498 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 ZNF41P51814 821 aaPredicted RBP20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 ARFIP2P53365 341 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 SUMO3P55854 103 aaPredicted RBP20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 CLDN18P56856 261 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 SRYQ05066 204 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 CDSNQ15517 529 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 BCL2A1Q16548 175 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 SYPL1Q16563 259 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 TMEM44Q2T9K0 475 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 RIPPLY2Q5TAB7 128 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 AP1ARQ63HQ0 302 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 SP5Q6BEB4 398 aaPredicted RBP20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 LURAP1LQ8IV03 231 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 LACC1Q8IV20 430 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 ANKFN1Q8N957 763 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 ZPLD1Q8TCW7 415 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 MARVELD3Q96A59 401 aa20.06■□□□□ 0.8
SMARCD2-206ENST00000577990 KDM4EB2RXH2 506 aaPredicted RBP20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 SHISA8B8ZZ34 492 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 UBL4AP11441 157 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 PEPDP12955 493 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 ETFAP13804 333 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 CD1EP15812 388 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 ZNF17P17021 662 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 ADH7P40394 386 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 CRATP43155 626 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 P2RX1P51575 399 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 CHRNEQ04844 493 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 PLPPR5Q32ZL2 321 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 NDUFAF6Q330K2 333 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 PAGE3Q5JUK9 113 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 LRIF1Q5T3J3 769 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 NSUN5P2Q63ZY6 315 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 CBLN3Q6UW01 205 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 LRRC74BQ6ZQY2 392 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 SEM1Q6ZVN7 128 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 CCDC71Q8IV32 467 aaPredicted RBP20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 CA5BP1Q8WTZ4 195 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 ZBTB8AQ96BR9 441 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 TRIB1Q96RU8 372 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 KLHDC3Q9BQ90 382 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 TUBA1CQ9BQE3 449 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 RAD21L1Q9H4I0 556 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 P2RX2Q9UBL9 471 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 ICAM5Q9UMF0 924 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 ZNF337Q9Y3M9 751 aa20.05■□□□□ 0.8
SMARCD2-206ENST00000577990 FBN2P35556 2912 aa20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 A0A0G2JNJ9 132 aa20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 A0A1W2PP18 115 aa20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 C7orf72A4D263 438 aa20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 CD8B2A6NJW9 211 aa20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 CLIC1O00299 241 aa20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 ZNF264O43296 627 aa20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 EIF4E2O60573 245 aaKnown RBP20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 CHRM4P08173 479 aa20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 NR2F1P10589 423 aa20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 PRF1P14222 555 aa20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 HTR1EP28566 365 aa20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 DSTNP60981 165 aa20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 SF3A3Q12874 501 aaKnown RBP eCLIP20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 MAPK14Q16539 360 aa20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 GTPBP8Q8N3Z3 284 aaPredicted RBP20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 TMCO5AQ8N6Q1 288 aa20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 SLC38A1Q9H2H9 487 aa20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 CALHM2Q9HA72 323 aa20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 THUMPD1Q9NXG2 353 aaKnown RBP20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 SLC25A37Q9NYZ2 338 aa20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 Q9UFV3 132 aa20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 L3MBTL1Q9Y468 752 aa20.04■□□□□ 0.8
SMARCD2-206ENST00000577990 H3BML4 177 aa20.03■□□□□ 0.8
SMARCD2-206ENST00000577990 NUDT14O95848 222 aa20.03■□□□□ 0.8
SMARCD2-206ENST00000577990 FGFBP1Q14512 234 aa20.03■□□□□ 0.8
SMARCD2-206ENST00000577990 EIF3MQ7L2H7 374 aaKnown RBP20.03■□□□□ 0.8
SMARCD2-206ENST00000577990 MSRB3Q8IXL7 192 aa20.03■□□□□ 0.8
SMARCD2-206ENST00000577990 MEIOBQ8N635 442 aa20.03■□□□□ 0.8
SMARCD2-206ENST00000577990 ZNF317Q96PQ6 595 aaPredicted RBP20.03■□□□□ 0.8
SMARCD2-206ENST00000577990 LAT2Q9GZY6 243 aa20.03■□□□□ 0.8
SMARCD2-206ENST00000577990 SLAMF8Q9P0V8 285 aa20.03■□□□□ 0.8
SMARCD2-206ENST00000577990 KLHL14Q9P2G3 628 aa20.03■□□□□ 0.8
SMARCD2-206ENST00000577990 LEF1Q9UJU2 399 aaPredicted RBP20.03■□□□□ 0.8
SMARCD2-206ENST00000577990 AP4B1Q9Y6B7 739 aa20.03■□□□□ 0.8
SMARCD2-206ENST00000577990 TACC2O95359 2948 aa20.03■□□□□ 0.8
SMARCD2-206ENST00000577990 CLCA1A8K7I4 914 aa20.02■□□□□ 0.8
SMARCD2-206ENST00000577990 HNRNPRO43390 633 aaKnown RBP20.02■□□□□ 0.8
SMARCD2-206ENST00000577990 TOXO94900 526 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms