RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 LILRA5A6NI73 299 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 A6NNC1 897 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 TP53I11O14683 189 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 ZIC2O95409 532 aaPredicted RBP6.21□□□□□ -1.42
SMG1-217ENST00000569764 IGLV3-25P01717 112 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 APRTP07741 180 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 PNMTP11086 282 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 F3P13726 295 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 UQCRBP14927 111 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 TPSB2P20231 275 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 GTF2E2P29084 291 aaKnown RBP6.21□□□□□ -1.42
SMG1-217ENST00000569764 RORAP35398 523 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 SOX18P35713 384 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 MEOX2P50222 304 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 CCR8P51685 355 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 NFATC3Q12968 1075 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 PCLAFQ15004 111 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 TPSAB1Q15661 275 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 ISXQ2M1V0 245 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 TMEM220Q6QAJ8 160 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 CCDC71Q8IV32 467 aaPredicted RBP6.21□□□□□ -1.42
SMG1-217ENST00000569764 OR6Y1Q8NGX8 325 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 NFKBIDQ8NI38 313 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 GRPEL2Q8TAA5 225 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 STK35Q8TDR2 534 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 GTF2H4Q92759 462 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 P2RY11Q96G91 374 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 FICDQ9BVA6 458 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 PRRG4Q9BZD6 226 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 DERL2Q9GZP9 239 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 NDUFAF4Q9P032 175 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 TANC1Q9C0D5 1861 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 A0A0B4J293 547 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 SPTY2D1-AS1A0A0U1RR47 76 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 GMNCA6NCL1 334 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 ANKDD1BA6NHY2 528 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 SERPINE3A8MV23 424 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 NRG2O14511 850 aaPredicted RBP6.2□□□□□ -1.42
SMG1-217ENST00000569764 OR10H3O60404 316 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 PET100P0DJ07 73 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 HOXB3P14651 431 aaPredicted RBP6.2□□□□□ -1.42
SMG1-217ENST00000569764 COX6B1P14854 86 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 MSX1P28360 303 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 CAPZBP47756 277 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 IDH3AP50213 366 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 WIPI1Q5MNZ9 446 aaPredicted RBP6.2□□□□□ -1.42
SMG1-217ENST00000569764 ZFP1Q6P2D0 407 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 FAM151BQ6UXP7 276 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 C16orf62Q7Z3J2 963 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 ZNF567Q8N184 647 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 ZNF548Q8NEK5 533 aaPredicted RBP6.2□□□□□ -1.42
SMG1-217ENST00000569764 FAR1Q8WVX9 515 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 SMPDL3AQ92484 453 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 FIG4Q92562 907 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 C4orf36Q96KX1 117 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 DDA1Q9BW61 102 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 FAIM2Q9BWQ8 316 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 ARMC7Q9H6L4 198 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 ROPN1Q9HAT0 212 aaPredicted RBP6.2□□□□□ -1.42
SMG1-217ENST00000569764 RAB18Q9NP72 206 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 SLCO1B3Q9NPD5 702 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 TNRC18O15417 2968 aaPredicted RBP6.2□□□□□ -1.42
SMG1-217ENST00000569764 TYROBPO43914 113 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 SNAP91O60641 907 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 POP7O75817 140 aaKnown RBP6.2□□□□□ -1.42
SMG1-217ENST00000569764 CYB5R3P00387 301 aaPredicted RBP6.2□□□□□ -1.42
SMG1-217ENST00000569764 ACP1P24666 158 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 KIR2DL1P43626 348 aaPredicted RBP6.2□□□□□ -1.42
SMG1-217ENST00000569764 IRF9Q00978 393 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 PMPCAQ10713 525 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 DNASE1L3Q13609 305 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 TRAM2Q15035 370 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.2□□□□□ -1.42
SMG1-217ENST00000569764 TMEM88Q6PEY1 159 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 CENPUQ71F23 418 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 TGM7Q96PF1 710 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 CCDC90BQ9GZT6 254 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 TAS2R13Q9NYV9 303 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 TAS2R9Q9NYW1 312 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 ALG5Q9Y673 324 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 EXOC1LA0A1B0GW35 172 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 TTC24A2A3L6 582 aaPredicted RBP6.2□□□□□ -1.42
SMG1-217ENST00000569764 TLCD2A6NGC4 264 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 A8MUI8 341 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 PRMT5O14744 637 aaPredicted RBP6.2□□□□□ -1.42
SMG1-217ENST00000569764 CCDC22O60826 627 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 ATXN1LP0C7T5 689 aaKnown RBP6.2□□□□□ -1.42
SMG1-217ENST00000569764 GIMD1P0DJR0 217 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 CCKBRP32239 447 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 OTX2P32243 289 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 CD80P33681 288 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 CDKN1AP38936 164 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 OR2B6P58173 313 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 ERVK-25P63136 954 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 DHODHQ02127 395 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 USF2Q15853 346 aaPredicted RBP6.2□□□□□ -1.42
SMG1-217ENST00000569764 SNAPC1Q16533 368 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 MRPL23Q16540 153 aaKnown RBP6.2□□□□□ -1.42
SMG1-217ENST00000569764 DEFB109BQ30KR1 87 aa6.2□□□□□ -1.42
SMG1-217ENST00000569764 RUNDC3AQ59EK9 446 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms