RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 OR5B17Q8NGF7 314 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 OR10Q1Q8NGQ4 319 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 OR1J1Q8NGS3 322 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 CCDC26Q8TAB7 109 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 AGR3Q8TD06 166 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 TAF15Q92804 592 aaKnown RBP eCLIP2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 FBXO32Q969P5 355 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 AZIN2Q96A70 460 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 MED8Q96G25 268 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 SGK494Q96LW2 274 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 TSSK2Q96PF2 358 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 NDNQ99608 321 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 PRMT1Q99873 361 aaKnown RBP2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 GABRG3Q99928 467 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 SYT15Q9BQS2 421 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 ACBD6Q9BR61 282 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 MED10Q9BTT4 135 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 NUP58Q9BVL2 599 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 VN1R1Q9GZP7 353 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 NACA2Q9H009 215 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 ZDHHC6Q9H6R6 413 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 A4GALTQ9NPC4 353 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 FARSBQ9NSD9 589 aaKnown RBP2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 AIPL1Q9NZN9 384 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 CA5BQ9Y2D0 317 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 MRPS28Q9Y2Q9 187 aaKnown RBP2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 ATG4BQ9Y4P1 393 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 SCN8AQ9UQD0 1980 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 COL12A1Q99715 3063 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 LRRK1Q38SD2 2015 aa2.9□□□□□ -1.95
HMGB1P6-201ENST00000569046 MAST4O15021 2626 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 HECTD1Q9ULT8 2610 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 ZNF462Q96JM2 2506 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 TNRC6AQ8NDV7 1962 aaKnown RBP2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 IGHV4-61A0A0C4DH41 118 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 A0A1B0GTQ1 180 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 A0A1W2PNU3 283 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 PRR32B1ATL7 298 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 MAPK13O15264 365 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 CSO75390 466 aaKnown RBP2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 TRMUO75648 421 aaKnown RBP2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 SEMA4FO95754 770 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 IGHV4-59P01825 116 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 IGHV4-34P06331 123 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 CCDC130P13994 396 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 RPA2P15927 270 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 PTPN6P29350 595 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 MAT2AP31153 395 aaKnown RBP2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 DUTP33316 252 aaKnown RBP2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 DLSTP36957 453 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 ACADVLP49748 655 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 CSRP3P50461 194 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 CCL11P51671 97 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 C21orf59P57076 290 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 MAP3K7CLP57077 242 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 RPS14P62263 151 aaKnown RBP2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 CX3CL1P78423 397 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 TNFRSF17Q02223 184 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 SMARCB1Q12824 385 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 ABRQ12979 859 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 ITGA9Q13797 1035 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 DDX39BQ13838 428 aaKnown RBP2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 TGIF1Q15583 401 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 RBBP7Q16576 425 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 LINC00303Q3SY05 128 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 SLC36A3Q495N2 470 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 ZFP69Q49AA0 526 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 GTDC1Q4AE62 458 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 LRRC23Q53EV4 343 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 TMEM41BQ5BJD5 291 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 CMPK2Q5EBM0 449 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 ZNF542PQ5EBM4 170 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 ADAMTSL4-AS1Q5T5F5 129 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 C16orf87Q6PH81 154 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 BHLHB9Q6PI77 547 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 TRMT11Q7Z4G4 463 aaKnown RBP2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 GPR141Q7Z602 305 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 SLC22A9Q8IVM8 553 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 ZDHHC21Q8IVQ6 265 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 MISPQ8IVT2 679 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 ZC3H3Q8IXZ2 948 aaKnown RBP2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 MAPKAPK5-AS1Q8N8E1 139 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 GBP7Q8N8V2 638 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 SIDT2Q8NBJ9 832 aaKnown RBP2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 STEAP2Q8NFT2 490 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 KBTBD8Q8NFY9 601 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 OR13C2Q8NGS9 318 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 SLC26A7Q8TE54 656 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 GANCQ8TET4 914 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 IRGQQ8WZA9 623 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 ZNF75CPQ92670 426 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 KLK6Q92876 244 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 PGM2Q96G03 612 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 HPDLQ96IR7 371 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 ART5Q96L15 291 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 PSKH2Q96QS6 385 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 XPO6Q96QU8 1125 aaKnown RBP2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 SECISBP2Q96T21 854 aaKnown RBP2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 PCDHB18PQ96TA0 734 aa2.89□□□□□ -1.95
HMGB1P6-201ENST00000569046 CCDC3Q9BQI4 270 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms