RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 FBXO34Q9NWN3 711 aa12.21□□□□□ -0.45
CNOT1-215ENST00000569020 DNAJC15Q9Y5T4 150 aa12.21□□□□□ -0.45
CNOT1-215ENST00000569020 NIPBLQ6KC79 2804 aaeCLIP12.2□□□□□ -0.46
CNOT1-215ENST00000569020 TRIM64A6NGJ6 449 aa12.2□□□□□ -0.46
CNOT1-215ENST00000569020 TRIM64BA6NI03 449 aa12.2□□□□□ -0.46
CNOT1-215ENST00000569020 TMEM114B3SHH9 223 aa12.2□□□□□ -0.46
CNOT1-215ENST00000569020 TRIM13O60858 407 aa12.2□□□□□ -0.46
CNOT1-215ENST00000569020 CNOT4O95628 575 aaKnown RBP12.2□□□□□ -0.46
CNOT1-215ENST00000569020 NUDT14O95848 222 aa12.2□□□□□ -0.46
CNOT1-215ENST00000569020 PSMB1P20618 241 aaKnown RBP12.2□□□□□ -0.46
CNOT1-215ENST00000569020 ATP6V1C1P21283 382 aa12.2□□□□□ -0.46
CNOT1-215ENST00000569020 MAPK1P28482 360 aa12.2□□□□□ -0.46
CNOT1-215ENST00000569020 AGTR1P30556 359 aa12.2□□□□□ -0.46
CNOT1-215ENST00000569020 PCLAFQ15004 111 aa12.2□□□□□ -0.46
CNOT1-215ENST00000569020 TMEM201Q5SNT2 666 aa12.2□□□□□ -0.46
CNOT1-215ENST00000569020 C4orf33Q8N1A6 199 aa12.2□□□□□ -0.46
CNOT1-215ENST00000569020 ZNF527Q8NB42 609 aa12.2□□□□□ -0.46
CNOT1-215ENST00000569020 POC1BQ8TC44 478 aa12.2□□□□□ -0.46
CNOT1-215ENST00000569020 PHOSPHO1Q8TCT1 267 aa12.2□□□□□ -0.46
CNOT1-215ENST00000569020 CPNE4Q96A23 557 aaPredicted RBP12.2□□□□□ -0.46
CNOT1-215ENST00000569020 FAM120BQ96EK7 910 aaKnown RBP12.2□□□□□ -0.46
CNOT1-215ENST00000569020 OTUB1Q96FW1 271 aaPredicted RBP12.2□□□□□ -0.46
CNOT1-215ENST00000569020 GATA5Q9BWX5 397 aaPredicted RBP12.2□□□□□ -0.46
CNOT1-215ENST00000569020 BTBD2Q9BX70 525 aa12.2□□□□□ -0.46
CNOT1-215ENST00000569020 PIGUQ9H490 435 aa12.2□□□□□ -0.46
CNOT1-215ENST00000569020 DUSP22Q9NRW4 184 aa12.2□□□□□ -0.46
CNOT1-215ENST00000569020 GIN1Q9NXP7 522 aa12.2□□□□□ -0.46
CNOT1-215ENST00000569020 GJE1A6NN92 205 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 HS3ST1O14792 307 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 PLAUP00749 431 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 HMGN2P05204 90 aaKnown RBP12.19□□□□□ -0.46
CNOT1-215ENST00000569020 FGF4P08620 206 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 LINGO3P0C6S8 592 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 BCKDHAP12694 445 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 PAX1P15863 534 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 EFNA1P20827 205 aaPredicted RBP12.19□□□□□ -0.46
CNOT1-215ENST00000569020 ELK4P28324 431 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 ADH6P28332 368 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 PCSK6P29122 969 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 SFTPDP35247 375 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 HPCAL1P37235 193 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 P2RX1P51575 399 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 PPP2R2BQ00005 443 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 ZNF117Q03924 483 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 FOXF1Q12946 379 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 LASP1Q14847 261 aaKnown RBP12.19□□□□□ -0.46
CNOT1-215ENST00000569020 RNPS1Q15287 305 aaKnown RBP12.19□□□□□ -0.46
CNOT1-215ENST00000569020 CD226Q15762 336 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 ZNF239Q16600 458 aaKnown RBP12.19□□□□□ -0.46
CNOT1-215ENST00000569020 NATD1Q8N6N6 113 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 ZNF611Q8N823 705 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 STEAP2Q8NFT2 490 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 ADAMTS15Q8TE58 950 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 EPS8L3Q8TE67 593 aaKnown RBP12.19□□□□□ -0.46
CNOT1-215ENST00000569020 RNF128Q8TEB7 428 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 TWIST2Q8WVJ9 160 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.19□□□□□ -0.463e-9■□□□□ 10.6
CNOT1-215ENST00000569020 ROBO4Q8WZ75 1007 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 CDS1Q92903 461 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 PPP3R2Q96LZ3 170 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 TACO1Q9BSH4 297 aaKnown RBP12.19□□□□□ -0.46
CNOT1-215ENST00000569020 HDHD5Q9BXW7 423 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 HOXD1Q9GZZ0 328 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 EML4Q9HC35 981 aaKnown RBP12.19□□□□□ -0.46
CNOT1-215ENST00000569020 SIRT3Q9NTG7 399 aaPredicted RBP12.19□□□□□ -0.46
CNOT1-215ENST00000569020 ATP6V1HQ9UI12 483 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 SNX8Q9Y5X2 465 aa12.19□□□□□ -0.46
CNOT1-215ENST00000569020 H3BNH8 94 aa12.18□□□□□ -0.46
CNOT1-215ENST00000569020 PIP5K1BO14986 540 aa12.18□□□□□ -0.46
CNOT1-215ENST00000569020 SCAMP2O15127 329 aaKnown RBP12.18□□□□□ -0.46
CNOT1-215ENST00000569020 SOX30O94993 753 aa12.18□□□□□ -0.46
CNOT1-215ENST00000569020 KRT16P08779 473 aa12.18□□□□□ -0.46
CNOT1-215ENST00000569020 SUMO3P55854 103 aaPredicted RBP12.18□□□□□ -0.46
CNOT1-215ENST00000569020 EXOSC6Q5RKV6 272 aaKnown RBP12.18□□□□□ -0.46
CNOT1-215ENST00000569020 ALKBH2Q6NS38 261 aa12.18□□□□□ -0.46
CNOT1-215ENST00000569020 CDC73Q6P1J9 531 aa12.18□□□□□ -0.46
CNOT1-215ENST00000569020 FBXO27Q8NI29 283 aa12.18□□□□□ -0.46
CNOT1-215ENST00000569020 ABHD3Q8WU67 409 aa12.18□□□□□ -0.46
CNOT1-215ENST00000569020 IGFBPL1Q8WX77 278 aa12.18□□□□□ -0.46
CNOT1-215ENST00000569020 KLHDC3Q9BQ90 382 aa12.18□□□□□ -0.46
CNOT1-215ENST00000569020 TMEM204Q9BSN7 226 aa12.18□□□□□ -0.46
CNOT1-215ENST00000569020 ACTRT3Q9BYD9 372 aa12.18□□□□□ -0.46
CNOT1-215ENST00000569020 NGBQ9NPG2 151 aa12.18□□□□□ -0.46
CNOT1-215ENST00000569020 ATAD3AQ9NVI7 634 aa12.18□□□□□ -0.46
CNOT1-215ENST00000569020 FAF1Q9UNN5 650 aaPredicted RBP12.18□□□□□ -0.46
CNOT1-215ENST00000569020 TRAF6Q9Y4K3 522 aa12.18□□□□□ -0.46
CNOT1-215ENST00000569020 GPC6Q9Y625 555 aaPredicted RBP12.18□□□□□ -0.46
CNOT1-215ENST00000569020 NUP214P35658 2090 aaPredicted RBP12.17□□□□□ -0.46
CNOT1-215ENST00000569020 TMEM233B4DJY2 109 aa12.17□□□□□ -0.46
CNOT1-215ENST00000569020 GTPBP1O00178 669 aaKnown RBP12.17□□□□□ -0.46
CNOT1-215ENST00000569020 ZNF195O14628 629 aa12.17□□□□□ -0.46
CNOT1-215ENST00000569020 ZNF500O60304 480 aaPredicted RBP12.17□□□□□ -0.46
CNOT1-215ENST00000569020 NPHS1O60500 1241 aa12.17□□□□□ -0.46
CNOT1-215ENST00000569020 PRKD3O94806 890 aa12.17□□□□□ -0.46
CNOT1-215ENST00000569020 CHRNGP07510 517 aa12.17□□□□□ -0.46
CNOT1-215ENST00000569020 IL32P24001 234 aa12.17□□□□□ -0.46
CNOT1-215ENST00000569020 SHC1P29353 583 aa12.17□□□□□ -0.46
CNOT1-215ENST00000569020 CCT3P49368 545 aaKnown RBP12.17□□□□□ -0.46
CNOT1-215ENST00000569020 ATP5J2P56134 94 aa12.17□□□□□ -0.46
CNOT1-215ENST00000569020 RPS4XP62701 263 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms