RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 GABRG1Q8N1C3 465 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 MNS1Q8NEH6 495 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 OR6Y1Q8NGX8 325 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 CEP70Q8NHQ1 597 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 FAM110BQ8TC76 370 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 ACTRT2Q8TDY3 377 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 CDS1Q92903 461 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 ZBED6CLQ96FA7 236 aaPredicted RBP13.82□□□□□ -0.2
NME3-211ENST00000568561 CCT7Q99832 543 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 REEP4Q9H6H4 257 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 UBQLN4Q9NRR5 601 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 GLRX2Q9NS18 164 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 GIN1Q9NXP7 522 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 RNF115Q9Y4L5 304 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 CUBNO60494 3623 aa13.82□□□□□ -0.2
NME3-211ENST00000568561 PLCE1Q9P212 2302 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 NPIPB8E9PQR5 432 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 EFNA2O43921 213 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 CRLF1O75462 422 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 SOX30O94993 753 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 PRPH2P23942 346 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 IL32P24001 234 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 PDE7AQ13946 482 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 TAB1Q15750 504 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 NDUFAF6Q330K2 333 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 PDSS1Q5T2R2 415 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 CBLN3Q6UW01 205 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 Q6ZSR9 355 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 TRABD2AQ86V40 505 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 CCDC63Q8NA47 563 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 ATP6V1C2Q8NEY4 427 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 STEAP2Q8NFT2 490 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 KBTBD8Q8NFY9 601 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 FBXO27Q8NI29 283 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 PHOSPHO1Q8TCT1 267 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 FBXW5Q969U6 566 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 FAM120BQ96EK7 910 aaKnown RBP13.81□□□□□ -0.2
NME3-211ENST00000568561 FCRL1Q96LA6 429 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 TUBB1Q9H4B7 451 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 ZCCHC3Q9NUD5 404 aaKnown RBP13.81□□□□□ -0.2
NME3-211ENST00000568561 KLHL13Q9P2N7 655 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 GIMAP2Q9UG22 337 aa13.81□□□□□ -0.2
NME3-211ENST00000568561 MAGED1Q9Y5V3 778 aaPredicted RBP13.81□□□□□ -0.2
NME3-211ENST00000568561 IGHV3-15A0A0B4J1V0 119 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 SMIM23A6NLE4 172 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 TMEM233B4DJY2 109 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 SLC28A1O00337 649 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 AZIN1O14977 448 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 RGS14O43566 566 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 NUDT14O95848 222 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 HMGN2P05204 90 aaKnown RBP13.8□□□□□ -0.2
NME3-211ENST00000568561 CD3EP07766 207 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 LINC00032P0C843 101 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 FRKP42685 505 aaPredicted RBP13.8□□□□□ -0.2
NME3-211ENST00000568561 DNAJB13P59910 316 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 POU6F2P78424 691 aaPredicted RBP13.8□□□□□ -0.2
NME3-211ENST00000568561 DMTNQ08495 405 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 FAPQ12884 760 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 LASP1Q14847 261 aaKnown RBP13.8□□□□□ -0.2
NME3-211ENST00000568561 TOMM34Q15785 309 aaPredicted RBP13.8□□□□□ -0.2
NME3-211ENST00000568561 GALNTL6Q49A17 601 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 RFTN2Q52LD8 501 aaPredicted RBP13.8□□□□□ -0.2
NME3-211ENST00000568561 EXOSC6Q5RKV6 272 aaKnown RBP13.8□□□□□ -0.2
NME3-211ENST00000568561 TMEM201Q5SNT2 666 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 NCMAPQ5T1S8 102 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 SEZ6L2Q6UXD5 910 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 MISPQ8IVT2 679 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 BANPQ8N9N5 519 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 GTPBP3Q969Y2 492 aaKnown RBP13.8□□□□□ -0.2
NME3-211ENST00000568561 ZNF764Q96H86 408 aaPredicted RBP13.8□□□□□ -0.2
NME3-211ENST00000568561 REXO5Q96IC2 774 aaKnown RBP13.8□□□□□ -0.2
NME3-211ENST00000568561 TXLNGYQ9BZA5 131 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 OR10A4Q9H209 315 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 COQ10BQ9H8M1 238 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 SIRT3Q9NTG7 399 aaPredicted RBP13.8□□□□□ -0.2
NME3-211ENST00000568561 OXSMQ9NWU1 459 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 NTMQ9P121 344 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 CARD8Q9Y2G2 431 aa13.8□□□□□ -0.2
NME3-211ENST00000568561 ALPK2Q86TB3 2170 aa13.79□□□□□ -0.2
NME3-211ENST00000568561 A0A1W2PQD3 144 aa13.79□□□□□ -0.2
NME3-211ENST00000568561 H3BQF6 201 aa13.79□□□□□ -0.2
NME3-211ENST00000568561 OVOL3O00110 214 aa13.79□□□□□ -0.2
NME3-211ENST00000568561 TBX19O60806 448 aa13.79□□□□□ -0.2
NME3-211ENST00000568561 NDUFS7O75251 213 aa13.79□□□□□ -0.2
NME3-211ENST00000568561 ADAP00813 363 aa13.79□□□□□ -0.2
NME3-211ENST00000568561 SHBGP04278 402 aa13.79□□□□□ -0.2
NME3-211ENST00000568561 DANCRP0C864 163 aa13.79□□□□□ -0.2
NME3-211ENST00000568561 CPA3P15088 417 aa13.79□□□□□ -0.2
NME3-211ENST00000568561 ENPP1P22413 925 aa13.79□□□□□ -0.2
NME3-211ENST00000568561 EDNRAP25101 427 aa13.79□□□□□ -0.2
NME3-211ENST00000568561 ACVR1BP36896 505 aa13.79□□□□□ -0.2
NME3-211ENST00000568561 SERPINB4P48594 390 aa13.79□□□□□ -0.2
NME3-211ENST00000568561 BSPH1Q075Z2 132 aa13.79□□□□□ -0.2
NME3-211ENST00000568561 TMEM176BQ3YBM2 270 aaPredicted RBP13.79□□□□□ -0.2
NME3-211ENST00000568561 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.79□□□□□ -0.2
NME3-211ENST00000568561 SFRP5Q5T4F7 317 aa13.79□□□□□ -0.2
NME3-211ENST00000568561 GTF2IRD2BQ6EKJ0 949 aa13.79□□□□□ -0.2
NME3-211ENST00000568561 ADAM5Q6NVV9 412 aa13.79□□□□□ -0.2
NME3-211ENST00000568561 FCRLAQ7L513 359 aa13.79□□□□□ -0.2
NME3-211ENST00000568561 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms