RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 OR6C76A6NM76 312 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 NTN3O00634 580 aaPredicted RBP13.49□□□□□ -0.25
COMMD4-221ENST00000567935 DRD5P21918 477 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 PPICP45877 212 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 ATP12AP54707 1039 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 OCA2Q04671 838 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 IL11RAQ14626 422 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 ZBED5Q49AG3 693 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 ENTPD8Q5MY95 495 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 MRPL2Q5T653 305 aaKnown RBP13.49□□□□□ -0.25
COMMD4-221ENST00000567935 MFSD4BQ5TF39 518 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 HIST2H2BCQ6DN03 193 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 FIGNL1Q6PIW4 674 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 ZNF550Q7Z398 422 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 GPR141Q7Z602 305 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 P3H2Q8IVL5 708 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 ZNF440Q8IYI8 595 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 ALDH16A1Q8IZ83 802 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 RNF113BQ8IZP6 322 aaKnown RBP13.49□□□□□ -0.25
COMMD4-221ENST00000567935 CACTIN-AS1Q8N1I8 211 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 PIGXQ8TBF5 258 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 FAM81AQ8TBF8 368 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 PTPMT1Q8WUK0 201 aaPredicted RBP13.49□□□□□ -0.25
COMMD4-221ENST00000567935 TRUB1Q8WWH5 349 aaKnown RBP13.49□□□□□ -0.25
COMMD4-221ENST00000567935 SLC41A3Q96GZ6 507 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 OR6C1Q96RD1 312 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 WFDC6Q9BQY6 131 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 DUSP21Q9H596 190 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 PNO1Q9NRX1 252 aaKnown RBP13.49□□□□□ -0.25
COMMD4-221ENST00000567935 CBLCQ9ULV8 474 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 SSUH2Q9Y2M2 353 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 GPR55Q9Y2T6 319 aaPredicted RBP13.49□□□□□ -0.25
COMMD4-221ENST00000567935 OR10H1Q9Y4A9 318 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 PCDHGB1Q9Y5G3 927 aa13.49□□□□□ -0.25
COMMD4-221ENST00000567935 FLNCQ14315 2725 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 SH3D21A4FU49 640 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 FRG2CA6NGY1 282 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 D6RAR5 112 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 NPIPB9F8W1W9 429 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 ZNF701M0R085 212 aaPredicted RBP13.48□□□□□ -0.25
COMMD4-221ENST00000567935 CLPSP04118 112 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 IGKV3-11P04433 115 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 CT45A8P0DMV1 189 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 CT45A9P0DMV2 189 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 FGF5P12034 268 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 CHMP24386 653 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 EPHA2P29317 976 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 ZNF136P52737 540 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 SLC37A1P57057 533 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 MVKQ03426 396 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 TUBA3CQ13748 450 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 PTGES3Q15185 160 aaKnown RBP13.48□□□□□ -0.25
COMMD4-221ENST00000567935 MAPK14Q16539 360 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 CT45A2Q5DJT8 189 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 FOXB2Q5VYV0 432 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 SLX4IPQ5VYV7 408 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 LAIR2Q6ISS4 152 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 ZNF613Q6PF04 617 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 NPSR1Q6W5P4 371 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 ZNF730Q6ZMV8 503 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 TMPRSS9Q7Z410 1059 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 B3GNT8Q7Z7M8 397 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 PPP1R3BQ86XI6 285 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 ENTHD1Q8IYW4 607 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 SVOPQ8N4V2 548 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 BPIFB6Q8NFQ5 453 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 RHOXF1Q8NHV9 184 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 DOK4Q8TEW6 326 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.48□□□□□ -0.25
COMMD4-221ENST00000567935 NODALQ96S42 347 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 ITPAQ9BY32 194 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 PRRG3Q9BZD7 231 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 TRIM2Q9C040 744 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 RBM38Q9H0Z9 239 aaKnown RBP13.48□□□□□ -0.25
COMMD4-221ENST00000567935 SYNDIG1Q9H7V2 258 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 COPS7AQ9UBW8 275 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 REV1Q9UBZ9 1251 aa13.48□□□□□ -0.25
COMMD4-221ENST00000567935 A0A087WUU8 490 aa13.47□□□□□ -0.25
COMMD4-221ENST00000567935 CPSF4LA6NMK7 179 aaKnown RBP13.47□□□□□ -0.25
COMMD4-221ENST00000567935 SCRG1O75711 98 aa13.47□□□□□ -0.25
COMMD4-221ENST00000567935 POU2F1P14859 743 aa13.47□□□□□ -0.25
COMMD4-221ENST00000567935 CSTF2P33240 577 aaKnown RBP eCLIP13.47□□□□□ -0.25
COMMD4-221ENST00000567935 GABREP78334 506 aa13.47□□□□□ -0.25
COMMD4-221ENST00000567935 SLC35A2P78381 396 aa13.47□□□□□ -0.25
COMMD4-221ENST00000567935 DCDP81605 110 aaKnown RBP13.47□□□□□ -0.25
COMMD4-221ENST00000567935 TSPAN31Q12999 210 aa13.47□□□□□ -0.25
COMMD4-221ENST00000567935 FGFBP1Q14512 234 aa13.47□□□□□ -0.25
COMMD4-221ENST00000567935 NSDHLQ15738 373 aa13.47□□□□□ -0.25
COMMD4-221ENST00000567935 NKAIN1Q4KMZ8 207 aa13.47□□□□□ -0.25
COMMD4-221ENST00000567935 KCTD8Q6ZWB6 473 aa13.47□□□□□ -0.25
COMMD4-221ENST00000567935 HMGN2P46Q86SG4 172 aa13.47□□□□□ -0.25
COMMD4-221ENST00000567935 CCDC71Q8IV32 467 aaPredicted RBP13.47□□□□□ -0.25
COMMD4-221ENST00000567935 ZNF527Q8NB42 609 aa13.47□□□□□ -0.25
COMMD4-221ENST00000567935 AGBL5Q8NDL9 886 aa13.47□□□□□ -0.25
COMMD4-221ENST00000567935 RCBTB1Q8NDN9 531 aa13.47□□□□□ -0.25
COMMD4-221ENST00000567935 C17orf47Q8NEP4 570 aa13.47□□□□□ -0.25
COMMD4-221ENST00000567935 CNIH3Q8TBE1 160 aa13.47□□□□□ -0.25
COMMD4-221ENST00000567935 SLC2A12Q8TD20 617 aa13.47□□□□□ -0.25
COMMD4-221ENST00000567935 HS6ST2Q96MM7 605 aa13.47□□□□□ -0.25
COMMD4-221ENST00000567935 Q96MT0 163 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms